Research Article |
Corresponding author: Huimin Wang ( whuimin19@126.com ) Corresponding author: Quan Lu ( luquan@caf.ac.cn ) Academic editor: Danny Haelewaters
© 2022 Guiheng Zheng, Minqi You, Xuening Li, Qinzheng Zhou, Zheng Wang, Huimin Wang, Quan Lu.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Zheng G, You M, Li X, Zhou Q, Wang Z, Wang H, Lu Q (2022) Diversity of fungi associated with Monochamus alternatus larval habitats in Bursaphelenchus xylophilus-infected Pinus massoniana and identification of two new ophiostomatalean species (Ascomycota, Ophiostomatales). MycoKeys 92: 1-25. https://doi.org/10.3897/mycokeys.92.80682
|
Bursaphelenchus xylophilus, a pathogenic pine wood nematode (PWN), is responsible for pine wilt disease (PWD), which has caused significant economic and ecological damage worldwide, particularly in East Asia. Multiple biological factors, such as the beetle vector Monochamus, symbiotic bacteria and associated fungi, are involved in the disease infection cycle. This study isolated and identified the fungal communities of Monochamus alternatus larval galleries and pupal chambers from different instars through field investigation, morphological observation and multi-locus DNA sequence analyses in Zhejiang Province, China. A total of 255 and 454 fungal strains were isolated from M. alternatus galleries and pupal chambers infected with PWN, from the 2nd–3rd and 4th–5th instar larvae, respectively. A total of 18 species of fungi were identified, 14 species were isolated from the 2nd–3rd instar larval galleries and six species from the galleries and pupal chambers of the 4th–5th instar larvae. Amongst them were six species belonging to four genera of ophiostomatalean fungi, including two novel species, Graphilbum xianjuensis sp. nov. and Ophiostoma taizhouense sp. nov. and four known species, Ceratocystiopsis weihaiensis, Ophiostoma ips, Sporothrix zhejiangensis and S. macroconidia. The findings revealed that the fungal diversity and abundance of the 2nd–3rd instar larvae differed markedly from those of the 4th–5th instar larvae. This difference could be the result of fungal succession. This study provides a thorough understanding of the fungi associated with PWD and lays the groundwork for future research.
Ceratocystiopsis, fungal succession, Graphilbum, Ophiostoma, pine wilt disease, Sporothrix, two new species
The pine wood nematode (PWN), Bursaphelenchus xylophilus (Steiner & Buhrer) Nickle, is a pathogenic nematode that is responsible for the devastating epidemic of pine wilt disease (PWD) worldwide (
The PWN is the predominant pathogen in this complex ecosystem (
Current research has shown that PWN has an important mycetophagous phase in its life history (
The invasion of beetles altered the internal habitat and mycoflora of pine trees (
This research aimed to compare the diversity of fungi in different instars of the PWN-infected M. alternatus larval galleries and pupal chambers in south-eastern China. Field surveys were used in conjunction with integrated morphological observation and multi-locus DNA sequence analysis to describe the diversity of fungi associated with PWN and M. alternatus. This study provides a scientifically reliable and theoretical foundation for effective PWD control from the fungal perspective.
From October to November 2020, fungi were isolated from 380 and 510 samples of different instars from M. alternatus larvae galleries and pupal chambers in Pinus massoniana, respectively, in the Huangyan District (28°56'90"N, 121°17'56"E), Xianju County (28°75'28"N, 120°59'97"E), Zhejiang Province. All the trees used in this study showed signs of death and sap stains and PWNs were simultaneously isolated from galleries and pupal chambers by Behrman funnel. The samples were collected by hand saw, individually placed in sterile envelopes, stored at 4 °C and separated within a week. The surfaces of galleries and pupal chambers were disinfected with 1.5% sodium hypochlorite for 1 min, rinsed with sterile water three times and then cut into approximately 3 × 3 mm2 tissue blocks. They were then inoculated on to a 2% (w/v) water agar medium (20 g agar powder in 1 l of deionised water) and cultured in the dark at 25 °C (
Species of the fungi isolated from Pinus massoniana infected by Monochamus alternates and Bursaphelenchus xylophilus in the current study.
Taxon | Species | 2nd–3rd instar larvae | 4th~5th instar larvae | ||
---|---|---|---|---|---|
number | isolation rate | number | isolation rate | ||
1 | Ceratocystiopsis weihaiensis | 3 | 1.18% | N/A | N/A |
Chaetomium globosum | 1 | 0.39% | N/A | N/A | |
Colletotrichum gloeosporioides | 8 | 3.14% | N/A | N/A | |
Cytospora sp. | 11 | 4.31% | N/A | N/A | |
Diplodia sapinea | 27 | 10.59% | 76 | 16.74% | |
Fusarium sp. | 10 | 3.92% | N/A | N/A | |
2 | Graphilbum sp. | N/A | N/A | 12 | 2.64% |
3 | Ophiostoma ips | N/A | N/A | 231 | 50.88% |
4 | Ophiostoma sp. | 62 | 24.31% | N/A | N/A |
Penicillium sp. | 2 | 0.78% | 5 | 1.10% | |
Pestalotiopsis sp. | N/A | N/A | 2 | 0.44% | |
Phialocephala sp. | 45 | 17.65% | N/A | N/A | |
Pseudocosmospora sp. | 14 | 5.49% | N/A | N/A | |
Schizophyllum sp. | 8 | 3.14% | N/A | N/A | |
5 | Sporothrix macroconidia | 4 | 1.57% | N/A | N/A |
6 | S. zhejiangensis | 8 | 3.14% | N/A | N/A |
Trichoderma atroviride | N/A | N/A | 107 | 23.57% | |
Xenoacremonium sp. | 37 | 14.51% | N/A | N/A | |
Unidentified | 15 | 5.88% | 21 | 4.63% | |
The total number of strains | 255 | 100% | 454 | 100% |
The growth of representative strains was monitored daily and the culture characteristics of the colonies were recorded. Microscopic features were observed using a BX51 Olympus microscope (Tokyo, Japan) with differential interference contrast. Fifty measurements were made for each microscopic taxonomical structure. The formula (min–) (mean–SD)–(mean+SD) (–max) was used to calculate averages, ranges, standard deviation (SD), minimum (min) and maximum (max) measurements, respectively. All relevant data pertaining to type specimens were deposited in MycoBank (www. MycoBank.org).
Strains of ophiostomatalean fungi isolated from Pinus massoniana infested by Monochamus alternatus and Bursaphelenchus xylophilus in the current study.
Taxon | Species | Strain no | Location | GenBank no | ||
---|---|---|---|---|---|---|
ITS | TUB2 | TEF1-α | ||||
1 | Ceratocystiopsis weihaiensis | CFCC 55742 CXY4012 | Huangyan | OK104016 | OM103280 | N/A |
CFCC 55743 CXY4013 | Huangyan | OK104017 | OM103281 | N/A | ||
CXY4019 | Huangyan | N/A | N/A | N/A | ||
2 | Graphilbum xianjuensis sp. nov. | CFCC 55738T CXY4010 | Xianju | OK104014 | OM103285 | ON033177 |
CFCC 55739 CXY4011 | Xianju | OK104015 | OM103286 | ON033178 | ||
CXY4018 | Xianju | N/A | N/A | N/A | ||
3 | Ophiostoma ips | CFCC 55735 CXY4005 | Xianju | OK104009 | OM056673 | N/A |
CFCC 55736 CXY4006 | Xianju | OK104010 | OM056674 | N/A | ||
CFCC 55732 CXY4007 | Xianju | OK104011 | OM056675 | N/A | ||
4 | Ophiostoma taizhouense sp. nov. | CFCC 55740T CXC4001 | Huangyan | OK104005 | OM103276 | N/A |
CFCC 55731 CXY4002 | Huangyan | OK104006 | OM103277 | N/A | ||
CFCC 55733 CXY4003 | Huangyan | OK104007 | OM103278 | N/A | ||
CFCC 55734 CXY4004 | Huangyan | OK104008 | OM103279 | N/A | ||
5 | Sporothrix macroconidia | CFCC 55741 CXY4009 | Huangyan | OK104013 | OL352730 | N/A |
CXY4016 | Huangyan | N/A | N/A | N/A | ||
CXY4017 | Huangyan | N/A | N/A | N/A | ||
6 | S. zhejiangensis | CFCC 55737 CXY4008 | Huangyan | OK104012 | OM103282 | N/A |
CXY4014 | Huangyan | N/A | OM103283 | N/A | ||
CXY4015 | Huangyan | N/A | OM103284 | N/A |
A 7 mm diameter mycelium plug was taken from a flourishing fungal colony using a sterile puncher and placed at the centre of 90 mm diameter 2% MEA plates, with one side of mycelium in contact with the media. Five replicate plates for each strain were incubated in a dark incubator at 5–35 °C with a temperature interval of 5 °C. The diameter of the colonies on each dish was measured every day by the orthogonal method until the fastest-growing mycelium reached the edge of the dish. The colony colour was then described using the
Mycelia of representative strains were scraped with a sterile blade from the edge of the medium and transferred to 2 ml Eppendorf tubes for DNA extraction. DNA extraction and purification were carried out using the Invisorb Spin Plant Mini Kit (Tiangen, Beijing, China) according to the manufacturer’s instructions. The primer pairs ITS1/ITS4 (
Polymerase chain reaction (PCR) amplification was performed using a Veriti 96-Well Fast Thermal Cycler (Applied Biosystems Veriti96, Foster City, CA, USA). PCR was carried out in a final volume of 25 μl (2.5 mM MgCl2, 1× PCR buffer, 0.2 mM dNTP, 0.2 mM of each primer and 2.5 U Taq-polymerase enzyme). The cycling conditions were the same as those described for primer design (
Sequencing reactions were performed using a CEQ DTCS Quick Start Kit (Beckman Coulter, Brea, CA, USA) according to the manufacturer’s instructions, with the same PCR primers as above. Nucleotide sequences were determined using a CEQ 2000 XL capillary automated sequencer (Beckman Coulter). Complementary and overlapping DNA electropherograms were checked and assembled using BioEdit v. 7.2.0. (
Preliminary identification of the strains was conducted using the standard basic local alignment search tool (BLAST) searches in NCBI GenBank (http://blast.ncbi.nlm.nih.gov/Blast.cgi) and sequences with the highest similarity were downloaded from GenBank. Alignment of the genes was performed using MAFFT 7.0 (https://mafft.cbrc.jp/alignment/server/) (
MP analyses were implemented using PAUP* version 4.0b10 (
ML analyses were carried out using RAxML-HPC (version 8.2.3;
BI analyses using Markov Chain Monte Carlo (MCMC) methods were implemented in MrBayes version 3.1.2 (
A total of 709 strains of fungi were isolated from the M. alternatus larval galleries and pupal chambers (2nd–5th instars). The strains were divided into 18 taxa, based on colony morphology and multi-locus DNA sequence alignment (ITS and BT) analysis. A total of 255 fungal strains, representing 14 taxa, were isolated from the galleries of 2nd–3rd instar larvae. Taxon 4 was the dominant taxon accounting for 62 of the 255 strains. A total of 454 fungal strains were isolated from the galleries and pupal chambers of the 4th–5th instar larvae and divided into six taxa. The dominant taxon was O. ips, accounting for 231 out of the 454 strains (Table
There were 709 strains obtained in this study, but some strains have a small number of strains. In this study, we selected 2–4 representative strains from each Taxon and nineteen representative strains of Ophiostomatales belonging to six tentative species (Taxa 1–6) were selected for phylogenetic analyses (Table
The ITS phylogenetic tree showed that six representative taxa (Table
ML tree of the ITS region of Ophiostoma, Sporothrix, Graphilbum, Ceratocystiopsis. Bootstrap values of ML/MP ≥ 70% are recorded at nodes as ML/MP and bold branches indicate posterior probability values ≥ 0.9. ML and MP, Bootstrap values < 70% are indicated by the symbol *. The tree is drawn to scale (see bar) with branch length measured in the number of substitutions per site. Strains representing ex-type sequences are marked with “T.” ML, Maximum Likelihood; MP, Maximum Parsimony; BI, Bayesian Inference and the final alignment of 734 positions, including gaps.
Taxon 1 included three isolates, all of which were included in the analyses (Tables
ML tree of Ceratocystiopsis generated from the combined (ITS+BT) sequence data. Bootstrap values of ML/MP ≥ 70% are recorded at nodes as ML/MP and bold branches indicate posterior probability values ≥ 0.9. ML and MP, Bootstrap values < 70% are indicated by the symbol *. The tree is drawn to scale (see bar) with branch length measured in the number of substitutions per site. Strains representing ex-type sequences are marked with “T.” Abbreviations: ML, Maximum Likelihood; MP, Maximum Parsimony; BI, Bayesian Inference and the final alignment of 1040 positions, including gaps.
Taxon 2 consisted of 12 isolates, three of which were used for phylogenetic analyses (Tables
ML tree of the BT region of Graphilbum. Bootstrap values of ML/MP ≥ 70% are recorded at nodes as ML/MP and bold branches indicate posterior probability values ≥ 0.9. ML and MP, Bootstrap values < 70% are indicated by the symbol *. The tree is drawn to scale (see bar) with branch length measured in the number of substitutions per site. Strains representing ex-type sequences are marked with “T.” Abbreviations: ML, Maximum Likelihood; MP, Maximum Parsimony; BI, Bayesian Inference and the final alignment of 548 positions, including gaps.
ML tree of the TEF region of Graphilbum. Bootstrap values of ML/MP ≥ 70% are recorded at nodes as ML/MP and bold branches indicate posterior probability values ≥ 0.9. ML and MP, Bootstrap values < 70% are indicated by the symbol *. The tree is drawn to scale (see bar) with branch length measured in the number of substitutions per site. Strains representing ex-type sequences are marked with “T.” Abbreviations: ML, Maximum Likelihood; MP, Maximum Parsimony; BI, Bayesian Inference and the final alignment of 725 positions, including gaps.
Taxon 3 was represented by three sequences that formed a well-supported clade with O. ips, based on the ITS tree (Fig.
ML tree of the O. ips complex generated from the combined (ITS+BT) sequence data. Bootstrap values of ML/MP ≥ 70% are recorded at nodes as ML/MP and bold branches indicate posterior probability values ≥ 0.9. ML and MP, Bootstrap values < 70% are indicated by the symbol *. The tree is drawn to scale (see bar) with branch length measured in the number of substitutions per site. Strains representing ex-type sequences are marked with “T.” Abbreviations: ML, Maximum Likelihood; MP, Maximum Parsimony; BI, Bayesian Inference and the final alignment of 953 positions, including gaps.
ML tree of the ITS region of O. minus complex. Bootstrap values of ML/MP ≥ 70% are recorded at nodes as ML/MP and bold branches indicate posterior probability values ≥ 0.9. ML and MP, Bootstrap values < 70% are indicated by the symbol *. The tree is drawn to scale (see bar) with branch length measured in the number of substitutions per site. Strains representing ex-type sequences are marked with “T.” Abbreviations: ML, Maximum Likelihood; MP, Maximum Parsimony; BI, Bayesian Inference and the final alignment of 537 positions, including gaps.
ML tree of the BT region of O. minus complex. Bootstrap values of ML/MP ≥ 70% are recorded at nodes as ML/MP and bold branches indicate posterior probability values ≥ 0.9. ML and MP, Bootstrap values < 70% are indicated by the symbol *. The tree is drawn to scale (see bar) with branch length measured in the number of substitutions per site. Strains representing ex-type sequences are marked with “T.” Abbreviations: ML, Maximum Likelihood; MP, Maximum Parsimony; BI, Bayesian Inference and the final alignment of 495 positions, including gaps.
Taxon 5 consisted of four isolates, three of which were used for the phylogenetic analyses. Based on the ITS and BT phylogenetic trees, Taxon 5 grouped with Sporothrix zhejiangensis (Figs
ML tree of Sporothrix generated from the BT sequence data. Bootstrap values of ML/MP ≥ 70% are recorded at nodes as ML/MP and bold branches indicate posterior probability values ≥ 0.9. ML and MP, Bootstrap values < 70% are indicated by the symbol *. The tree is drawn to scale (see bar) with branch length measured in the number of substitutions per site. Strains representing ex-type sequences are marked with “T.” Abbreviations: ML, Maximum Likelihood; MP, Maximum Parsimony; BI, Bayesian Inference and the final alignment of 313 positions, including gaps.
Taxon 6 consisted of eight isolates, three of which were selected for analysis. Taxon 6 grouped with Sporothrix macroconidia, based on the ITS and BT phylogenetic trees (Figs
According to the ITS and BT phylogenetic analyses, six different taxa (Taxon 1–6) were identified in this study. They represent four known species, Ceratocystiopsis weihaiensis, O. ips, S. macroconidia and S. zhejiangensis (
The epithet xianju (Latin) refers to the type locality.
China, Zhejiang, Xianju County, from Monochamus alternatus galleries and pupal chambers of Pinus massoniana infested by Bursaphelenchus xylophilus, December 2020, collected by G. H. Zheng, culture ex-holotype CFCC55738 = CXY4010.
Sexual morph: not observed.
Asexual form: Hyalorhincladiella-like. Conidiogenous cells were simple or loosely branched, (9.12–) (15.44) – (48.64) (–62.49) × (1.25–) (1.53) – (2.21) (–2.45) μm. Conidia hyaline, smooth, cylindrical, aseptate, (4.76–) (6.07) – (9.87) (–13.41) × (0.99 –) (1.32) – (2.1) (–2.65) μm.
Colonies on 2% MEA reaching 44.9 mm diameter, after incubation in the dark at 25 °C for 3 d, growth rate up to 14.98 mm/d at the fastest and colony margin irregular. Mycelium superficial to flocculose or floccose, hyaline, reverse grey-white. The optimal temperature for growth at 30 °C; no growth was observed at 5 °C.
Larval galleries and pupal chambers of Monochamus alternatus in Pinus massoniana, infested by Bursaphelenchus xylophilus, in Zhejiang Province, China.
China, Zhejiang, from Monochamus alternatus galleries and pupal chambers of Pinus massoniana infested by Bursaphelenchus xylophilus, December 2020, collected by G. H. Zheng, CFCC55739 = CXY4011, CXY4018.
Only the Hyalorhincladiella-like asexual form was observed in Graphilbum xianjuensis. This is closely related to the G. acuminatum, G. anningense and G. translucens, based on the ITS, BT and TEF1-α phylogenetic trees (Figs
‘taizhou’ (Latin) refers to the type locality.
China, Zhejiang Province, Taizhou City, from Monochamus alternatus galleries of Pinus massoniana infested by Bursaphelenchus xylophilus, October 2020, collected by G. H. Zheng and Q. Lu, culture ex-holotype CFCC55740 = CXY4001.
Sexual morph: not observed.
Asexual form: Hyalorhincladiella-like. Conidiophores abundant, conidiogenous cells single, disposed in a dense rachis (3.08–) (6.6) – (15.63) (–23.07) × (1.11–) (1.44) – (2.23) (–2.9) μm. Conidia hyaline, smooth, lunate, ellipsoid to ovoid, curvulate, aseptate, (3.24–) (4.27) – (7.42) (–10.08) × (1.17–) (1.6) – (2.39) (–2.86) μm.
Colonies on 2% MEA reaching 62.5 mm diameter, after incubation in the dark at 25 °C for 3 d, growth rate up to 22.83 mm/d at the fastest, colony margin smooth, hyphae are superficial on agar. Some white mycelium was produced early during growth and became black after 8–15 d, transitioning from brown to dark brown. The optimal temperature for growth at 30 °C; no growth was observed at 5 °C.
Larval galleries of Monochamus alternatus in Pinus massoniana, infested by Bursaphelenchus xylophilus, in Zhejiang Province, China.
China, Zhejiang, Taizhou City, from Monochamus alternatus galleries of Pinus massoniana infested by Bursaphelenchus xylophilus, October 2020, collected by G. H. Zheng and Q. Lu, CFCC55731 = CXY4002, CFCC55733 = CXY4003, CFCC55734 = CXY4004.
Only the Hyalorhincladiella-like asexual form was observed in Ophiostoma taizhouense. According to ITS and BT phylogenetic analysis, it has a well-supported independent clade with Ophiostoma sp.1 (CFCC52628) and is closely related to O. allantosporum, O. pseudotsugae and O. wuyingensis (Figs
In the current study, 255 (containing 14 species) and 454 (containing six species) strains were obtained from M. alternatus larval galleries and pupal chambers of 2nd–3rd and 4th–5th instar, respectively, in P. massoniana infested with PWN in the Zhejiang Province, south-eastern China (Table
Only two common fungal species were obtained from both 2nd–3rd instar larval galleries, 4th–5th instar larval galleries and pupal chambers. The abundance of D. sapinea (103 out of 709) was higher than that of Penicillium sp. (7 out of 709). Diplodia sapinea is commonly isolated from P. nigra tip blight, P. halepensis and P. pinaster branch cankers worldwide (
Ophiostoma ips was first reported in pine trees associated with bark beetles in the south-eastern United States (
Ophiostoma taizhouense was the second most frequently isolated species of ophiostomatalean fungi in our study (62 out of the 255 strains); nevertheless, it was only associated with 2nd–3rd instar larvae. The association between O. taizhouense and PWD needs further experimental verification as a new species. Although the isolation rate of Phialocephala sp. and Xenoacremonium sp. is relatively high in 2nd–3rd instar larvae, these two fungi are both endophytes and there are no reports relating them to PWD.
In addition, three known ophiostomatalean fungi (C. weihaiensis, S. macroconidia and S. zhejiangensis) and one new species (G. xianjuensis) were revealed with low isolation rates during the survey. Simultaneously, some common endophytic and saprophytic fungi were isolated from the galleries and pupal chambers of M. alternatus larvae. The relationship between these fungi and PWN has not yet been reported.
In this study, a relatively large diversity of fungal species was obtained and identified as associated with PWN and M. alternatus in south-eastern China. The results showed that the fungal diversity and abundance of the 2nd–3rd instar larvae differed from those of the 4th–5th instar larvae. Fungi play an important role during the successful survival, reproduction and spread of PWN (
This work was supported by Zhejiang Science and Technology Program (2020C02007) and the National Natural Science Foundation of China (Project Nos. 32071769, 31770682). We thank Prof. Jiafu Hu of the Zhejiang A&F University for sampling in the fieldwork. We thank Editage (www.editage.cn) for its linguistic assistance during the preparation of this manuscript.