Research Article |
Corresponding author: Cheng-Ming Tian ( chengmt@bjfu.edu.cn ) Academic editor: Ajay Kumar Gautam
© 2021 Ning Jiang, Qin Yang, Xin-Lei Fan, Cheng-Ming Tian.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Jiang N, Yang Q, Fan X-L, Tian C-M (2021) Micromelanconis kaihuiae gen. et sp. nov., a new diaporthalean fungus from Chinese chestnut branches in southern China. MycoKeys 79: 1-16. https://doi.org/10.3897/mycokeys.79.65221
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Melanconis-like fungi are distributed in several families of Diaporthales, mainly Juglanconidaceae, Melanconidaceae, Melanconiellaceae and Pseudomelanconidaceae. A new Melanconis-like genus of Pseudomelanconidaceae was discovered on branches of Chinese chestnut (Castanea mollissima) in southern China, which was confirmed by both morphology and phylogenetic analysis of combined ITS, LSU, tef1a and rpb2 sequences. The new genus Micromelanconis is characterized by two types of conidia from natural substrate and manual media of PDA, respectively. Conidia from Chinese chestnut branches are pale brown, ellipsoid, multiguttulate, aseptate with hyaline sheath. While conidia from PDA plates are pale brown, long dumbbell-shaped, narrow at the middle and wide at both ends, multiguttulate, aseptate, and also with hyaline sheath. All Pseudomelanconidaceae species were only reported on tree branches in China until now. More interesting taxa may be discovered if detailed surveys on tree-inhabiting fungi are carried out in East Asia in the future.
Castanea mollissima, Diaporthales, DNA phylogeny, Melanconis, systematics
Diaporthales, a species-rich order within Sordariomycetes of Ascomycota, is characterized by perithecia with elongate beaks, often forming within stromatic tissues, deliquescent paraphyses, and asci that have a refractive apical annulus (
Diaporthales is well classified into families based on morphological and phylogenetic studies (
Melanconis-like taxa are distributed in several families of Diaporthales, mainly Juglanconidaceae, Melanconidaceae, Melanconiellaceae and Pseudomelanconidaceae, which are four morphologically similar clades in distinct phylogenetic clades within this order (
Castanea, commonly known as chestnut trees, is a worldwide genus containing several economic species. Chinese chestnut (C. mollissima), is widely cultivated in most of the provinces in China. Previous studies have revealed that seven families (Coryneaceae, Cryphonectriaceae, Cytosporaceae, Diaporthaceae, Erythrogloeaceae, Gnomoniaceae and Pseudomelanconidaceae) of Diaporthales have been reported on branches of Castanea. Coryneum castaneicola, C. gigasporum and C. suttonii of Coryneaceae were reported on dead and diseased Castanea mollissima branches (
In the present study, investigations were conducted in Castanea mollissima plantations in Hunan Province of south China. Two Melanconis-like specimens were collected on a cultivated chestnut tree. The aim of the present study was to identify the fresh collections and confirm their phylogenetic positions.
The fresh specimens of diseased and dead chestnut branches were collected in a Castanea mollissima plantation in Hunan Province of south China. Morphological characteristics of the conidiomata were determined under a Nikon AZ100 dissecting stereomicroscope. More than 20 fruiting bodies were sectioned, and 50 conidia were selected randomly for measurement using a Leica compound microscope (LM, DM 2500). Isolates were obtained by removing a mucoid conidial mass from conidiomata, spreading the suspension onto the surface of 1.8% potato dextrose agar (PDA), and incubated at 25 °C for up to 24 h. Single germinating conidium was removed and plated onto fresh PDA plates. Cultural characteristics of isolates incubated on PDA in the dark at 25 °C were recorded, including the colony color and conidiomata structures. Specimens were deposited in the Museum of the Beijing Forestry University (
Genomic DNA was extracted from colonies grown on cellophane-covered PDA, using a cetyltrimethylammonium bromide (CTAB) method (
For phylogenetic reconstruction, newly-generated sequences of ITS, LSU, tef1a and rpb2 were initially subjected to BLAST search (BLASTn) in NCBI website (https://www.ncbi.nlm.nih.gov). Then species and their sequences from recently published articles were selected and listed in Table
ML and Bayesian analysis were implemented on the CIPRES Science Gateway portal (https://www.phylo.org) using RAxML-HPC BlackBox 8.2.10 (
Details of the isolates included for molecular study used in this study.
Species | Isolates | GenBank accession numbers | |||
---|---|---|---|---|---|
ITS | LSU | tef1a | rpb2 | ||
Apiognomonia errabunda | AR 2813 | DQ313525 | NG027592 | DQ313565 | DQ862014 |
Apiosporopsis carpinea | CBS 771.79 | NA | AF277130 | NA | NA |
Apoharknessia insueta | CBS 111377* | JQ706083 | AY720814 | MN271820 | NA |
CBS 114575 | MN172402 | MN172370 | MN271821 | NA | |
Asterosporium asterospermum | MFLU 15-3555 | NA | MF190062 | NA | NA |
Auratiopycnidiella tristaniopsis | CBS 132180* | JQ685516 | JQ685522 | MN271825 | NA |
CPC 16371 | MN172405 | MN172374 | MN271826 | NA | |
Aurifilum marmelostoma | CBS 124928* | FJ890495 | MH874934 | MN271827 | MN271788 |
Celoporthe eucalypti | CBS 127190* | HQ730837 | HQ730863 | HQ730850 | MN271790 |
Celoporthe woodiana | CBS 118785* | DQ267131 | MN172375 | JQ824071 | MN271791 |
Chiangraiomyces bauhiniae | MFLUCC 17-1669 | MF190119 | MF190064 | MF377598 | MF377603 |
Coniella africana | CBS 114133* | AY339344 | AY339293 | KX833600 | KX833421 |
Coniella eucalyptorum | CBS 112640* | AY339338 | AY339290 | KX833637 | KX833452 |
Coniella fusiformis | CBS 141596* | KX833576 | KX833397 | KX833674 | KX833481 |
Coniella javanica | CBS 455.68* | KX833583 | KX833403 | KX833683 | KX833489 |
Coryneum gigasporum | CFCC 52319* | MH683565 | MH683557 | MH685737 | MH685729 |
Coryneum umbonatum | D201 | MH674329 | MH674329 | MH674337 | MH674333 |
Cryphonectria decipens | CBS 129353 | EU442655 | MN172386 | MN271845 | MN271797 |
Cryptometrion aestuescens | CBS 124007* | GQ369457 | MN172387 | MN271851 | MN271798 |
Cytospora chrysosperma | CFCC 89982 | KP281261 | KP310805 | KP310848 | KU710952 |
Cytospora elaeagni | CFCC 89633 | KF765677 | KF765693 | KU710919 | KU710956 |
Dendrostoma aurorae | CFCC 52753* | MH542498 | MH542646 | MH545447 | MH545405 |
Dendrostoma castaneae | CFCC 52745* | MH542488 | MH542644 | MH545437 | MH545395 |
Dendrostoma chinense | CFCC 52755* | MH542500 | MH542648 | MH545449 | MH545407 |
Dendrostoma dispersum | CFCC 52730* | MH542467 | MH542629 | MH545416 | MH545374 |
Dendrostoma mali | CFCC 52102* | MG682072 | MG682012 | MG682052 | MG682032 |
Dendrostoma osmanthi | CFCC 52106* | MG682073 | MG682013 | MG682053 | MG682033 |
Dendrostoma parasiticum | CFCC 52762* | MH542482 | MH542638 | MH545431 | MH545389 |
Dendrostoma qinlingense | CFCC 52732* | MH542471 | MH542633 | MH545420 | MH545378 |
Dendrostoma quercinum | CFCC 52103* | MG682077 | MG682017 | MG682057 | MG682037 |
Dendrostoma quercus | CFCC 52739* | MH542476 | MH542635 | MH545425 | MH545383 |
Dendrostoma shaanxiense | CFCC 52741* | MH542486 | MH542642 | MH545435 | MH545393 |
Dendrostoma shandongense | CFCC 52759* | MH542504 | MH542652 | MH545453 | MH545411 |
Diaporthosporella cercidicola | CFCC 51994* | KY852492 | KY852515 | MN271855 | NA |
Diaporthostoma machili | CFCC 52100* | MG682080 | MG682020 | MG682060 | MG682040 |
CFCC 52101 | MG682081 | MG682021 | MG682061 | MG682041 | |
Dwiroopa lythri | CBS 109755* | MN172410 | MN172389 | MN271859 | MN271801 |
Dwiroopa punicae | CBS 143163* | MK510676 | MK510686 | NA | MK510692 |
Foliocryphia eucalypti | CBS 124779* | GQ303276 | GQ303307 | MN271861 | MN271802 |
Foliocryphia eucalyptorum | CBS 142536* | KY979772 | KY979827 | MN271862 | MN271803 |
Gnomonia gnomon | CBS 199.53 | DQ491518 | AF408361 | EU221885 | EU219295 |
Harknessia australiensis | CBS 132119* | JQ706085 | JQ706211 | MN271863 | NA |
Harknessia capensis | CBS 111829* | AY720719 | AY720816 | MN271864 | NA |
Harknessia ellipsoidea | CBS 132121* | JQ706087 | JQ706213 | MN271865 | NA |
Harknessia eucalypti | CBS 342.97 | AY720745 | AF408363 | MN271866 | NA |
Holocryphia eucalypti | CBS 115842* | MN172411 | MN172391 | MN271882 | MN271804 |
Immersiporthe knoxdaviesiana | CBS 132862* | JQ862765 | JQ862755 | MN271886 | MN271805 |
Juglanconis juglandina | CBS 121083 | KY427148 | KY427148 | KY427217 | KY427198 |
Juglanconis oblonga | MAFF 410216 | KY427153 | KY427153 | KY427222 | KY427203 |
Juglanconis pterocaryae | MAFF 410079 | KY427155 | KY427155 | KY427224 | KY427205 |
Lamproconium desmazieri | MFLUCC 15-0870 | KX430134 | KX430135 | MF377591 | MF377605 |
MFLUCC 15-0872 | KX430138 | KX430139 | MF377593 | MF377606 | |
Macrohilum eucalypti | CPC 10945 | DQ195781 | DQ195793 | NA | MN271809 |
CPC 19421 | KR873244 | KR873275 | NA | MN271810 | |
Mastigosporella anisophylleae | CBS 136421* | KF779492 | KF777221 | MN271892 | NA |
Mastigosporella pigmentata | COAD 2370* | MG587929 | MG587928 | NA | NA |
Melanconiella ellisii | BPI 878343 | JQ926271 | JQ926271 | JQ926406 | JQ926339 |
Melanconiella spodiaea | MSH | JQ926298 | JQ926298 | JQ926431 | JQ926364 |
Melanconis betulae | CFCC 50471 | KT732952 | KT732971 | KT733001 | KT732984 |
Melanconis itoana | CFCC 50474 | KT732955 | KT732974 | KT733004 | KT732987 |
Melanconis stilbostoma | CFCC 50475 | KT732956 | KT732975 | KT733005 | KT732988 |
Micromelanconis kaihuiae | CFCC 54572* | MW414473 | MW414373 | MW419880 | MW419878 |
KH5-4 | MW414474 | MW414374 | MW419881 | MW419879 | |
Nakataea oryzae | CBS 243.76 | KM484861 | DQ341498 | NA | NA |
Neopseudomelanconis castaneae | CFCC 52787* | MH469162 | MH469164 | NA | NA |
Phaeoappendicospora thailandensis | MFLU 12-2131 | MF190157 | MF190102 | NA | NA |
Prosopidicola albizziae | CPC 27478 | KX228274 | KX228325 | NA | NA |
Prosopidicola mexicana | CBS 113529 | AY720709 | NA | NA | NA |
Pseudomelanconis caryae | CFCC 52110* | MG682082 | MG682022 | MG682062 | MG682042 |
Pseudoplagiostoma corymbiae | CPC 14161 | GU973510 | GU973604 | GU973540 | NA |
Pseudoplagiostoma oldii | CBS 115722 | GU973535 | GU973610 | GU973565 | NA |
Pseudoplagiostoma variabile | CBS 113067 | GU973536 | GU973611 | GU973566 | NA |
Pyricularia grisea | Ina168 | NA | AB026819 | NA | NA |
Pyrispora castaneae | CFCC 54349 | MW208108 | MW208105 | MW227340 | MW218535 |
CFCC 54351 | MW208110 | MW208107 | MW227342 | MW218537 | |
Sillia karstenii | MFLU 16-2864 | KY523482 | KY523500 | NA | KY501636 |
Sirococcus tsugae | CBS 119626 | EU199203 | EU199136 | EF512534 | EU199159 |
Stegonsporium acerophilum | CBS 117025 | EU039982 | EU039993 | EU040027 | KF570173 |
Stilbospora longicornuta | CBS 122529* | KF570164 | KF570164 | KF570232 | KF570194 |
Synnemasporella aculeans | CFCC 52094 | MG682086 | MG682026 | MG682066 | MG682046 |
Synnemasporella toxicodendri | CFCC 52097* | MG682089 | MG682029 | MG682069 | MG682049 |
Thailandiomyces bisetulosus | BCC 00018 | NA | EF622230 | NA | NA |
Tirisporella beccariana | BCC 38312 | NA | JQ655449 | NA | NA |
Tubakia seoraksanensis | CBS 127490* | MG591907 | KP260499 | MG592094 | NA |
Tubakia iowensis | CBS 129012* | MG591879 | MG591971 | MG592064 | NA |
Ursicollum fallax | CBS 118663* | DQ368755 | EF392860 | MN271897 | MN271816 |
The ITS, LSU, tef1a and rpb2, and combined data matrices contained 624, 867, 513, 865, and 2869 characters with gaps, respectively. The alignment comprised 92 strains, with Nakataea oryzae (CBS 243.76) and Pyricularia grisea (Ina168) from Magnaporthales as outgroup taxa. The ML analysis yielded a tree with a ln likelihood value of –45806.266577 and the following model parameters: alpha = 0.298226, Π(A) = 0.241173, Π(C) = 0.258552, Π(G) = 0.275145, and Π(T) = 0.225130. For BI analyses, the general time reversible model, additionally assuming a proportion of invariant sites with gamma-distributed substitution rates of the remaining sites (GTR+I+G), was determined to be the best for the ITS, LSU, and tef1a loci by MrModeltest, whereas the most appropriate model for the rpb2 locus was the Tamura-Nei model, additionally assuming a proportion of invariant sites with gamma-distributed substitution rates of the remaining sites (TrN+I+G). The phylogeny resulting from the RAxML maximum likelihood analysis of the combined gene sequence data is shown in Fig.
The Diaporthales separates into 32 clades, representing 32 families, and the new isolates were clustered with a well-supported clade (ML/BI = 100/1) in Pseudomelanconidaceae. The two new isolates were different from any known genera in Pseudomelanconidaceae, and represented a new genus (Fig.
Phylogram of Diaporthales from a maximum likelihood analysis based on combined ITS, LSU, tef1a and rpb2. Values above the branches indicate maximum likelihood bootstrap (left, ML BP ≥ 50%) and Bayesian probabilities (right, BI PP ≥ 0.90). The tree is rooted with Nakataea oryzae (CBS 243.76) and Pyricularia grisea (Ina168). New species proposed in the current study is in blue and the ex-type strains are marked with *.
Name derived from micro- and the genus name Melanconis.
Micromelanconis kaihuiae C.M. Tian & N. Jiang.
Sexual morph: not observed. Asexual morph: Conidiomata acervular, conspicuous, immersed in host bark to erumpent, covered by brown to blackish exuding conidial masses at maturity. Central column beneath the disc more or less conical. Conidiophores unbranched, aseptate, cylindrical, pale brown, smooth-walled. Conidiogenous cells annellidic, occasionally with distinct annellations and collarettes. Conidia hyaline when immature, becoming pale brown, ellipsoid, multiguttulate, aseptate, with hyaline sheath. Conidiomata formed on PDA after three weeks, randomly distributed, and black. Conidiophores unbranched, septate, cylindrical, pale brown, smooth-walled. Conidiogenous cells annellidic. Conidia pale brown, long dumbbell-shaped, narrow at the middle and wide at both ends, multiguttulate, aseptate, with hyaline sheath.
Micromelanconis is the third genus after Neopseudomelanconis and Pseudomelanconis in the family Pseudomelanconidaceae (Fig.
Named after Kaihui Yang, a Chinese heroine; Kaihui is also the name of the town where holotype was collected.
Morphology of Micromelanconis kaihuiae on branches of Castanea mollissima (
Sexual morph: not observed. Asexual morph: Conidiomata acervular, 350–800 μm diam., conspicuous, immersed in host bark to erumpent, covered by brown to blackish exuding conidial masses at maturity. Central column beneath the disc more or less conical. Conidiophores unbranched, aseptate, cylindrical, pale brown, smooth-walled. Conidiogenous cells annellidic, occasionally with distinct annellations and collarettes, 12.4–47.1 × 1.2–3.8 μm. Conidia hyaline when immature, becoming pale brown, ellipsoid, multiguttulate, aseptate, 7.6–10.3 × 3.1–4.1 μm, L/W = 2–3.2, with hyaline sheath, 1 μm.
Colony on PDA at 25 °C irregular, grey olivaceous, margin becoming diffuse, aerial hyphae short, dense, surface becoming imbricate, growth limited and ceasing after two weeks. Conidiomata formed after three weeks, randomly distributed, black. Conidiophores unbranched, septate, cylindrical, pale brown, smooth-walled. Conidiogenous cells annellidic, 9.1–18.5 × 2.5–5.3 μm. Conidia pale brown, long dumbbell-shaped, narrow at the middle and wide at both ends, multiguttulate, aseptate, 10.4–13.5 × 4–5 μm, L/W = 2.3–3.3, with hyaline sheath, 1.5 μm.
China, Hunan Province, Changsha City, Changsha County, Kaihui Town, chestnut plantation, 40°24'32.16"N, 117°28'56.24"E, 262 m asl, on stems and branches of Castanea mollissima, Tian Chengming and Ning Jiang, 10 November 2020 (
Micromelanconis kaihuiae on Castanea mollissima (Fagaceae, Fagales) is phylogenetically close to Neopseudomelanconis castaneae on Castanea mollissima and Pseudomelanconis caryae on Carya cathayensis (Juglandaceae, Juglandales) (Fig.
1 | On Carya of Juglandaceae, conidia ellipsoid to oblong and aseptate | Pseudomelanconis caryae |
– | On Castanea of Fagaceae | 2 |
2 | Conidia aseptate | Micromelanconis kaihuiae |
– | Conidia septate | Neopseudomelanconis castaneae |
Diaporthales is a well-studied order based on integrated approaches of morphology and phylogeny in recent years (
Hosts are useful taxonomic information in some families of Diaporthales, such as Coryneaceae, Cryphonectriaceae, Erythrogloeaceae and Gnomoniaceae (
This study is financed by the National Natural Science Foundation of China (Project No.: 31670647). We are grateful to Chungen Piao and Minwei Guo (China Forestry Culture Collection Center, Chinese Academy of Forestry, Beijing) for support of strain preservation during this study.