Research Article |
Corresponding author: Wen-Ying Zhuang ( zhuangwy@im.ac.cn ) Academic editor: Huzefa Raja
© 2020 Zhao-Qing Zeng, Huan-Di Zheng, Xin-Cun Wang, Sheng-Long Wei, Wen-Ying Zhuang.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Zeng Z-Q, Zheng H-D, Wang X-C, Wei S-L, Zhuang W-Y (2020) Ascomycetes from the Qilian Mountains, China – Hypocreales. MycoKeys 71: 119-137. https://doi.org/10.3897/mycokeys.71.55009
|
To investigate fungi from the Qilian Mountains in Gansu Province, ascomycetous specimens were collected and hypocrealean fungi were examined. Eighteen species belonging to six genera in the families Hypocreaceae and Nectriaceae were identified, including 11 species of Hypomyces and Trichoderma in Hypocreaceae and seven species of Nectria, Stylonectria, Thelonectria, and Thyronectria in Nectriaceae. Among them, Stylonectria qilianshanensis and Trichoderma gansuanum are new to science. DNA sequence analyses of combined ACL1, ITS, RPB2, and TEF1 regions confirmed their taxonomic placements. Morphological distinctions between the new species and their close relatives are discussed. Hypomyces tremellicola is reported for the first time in China.
Biodiversity, Hypocreaceae, Nectriaceae, sequence analysis, taxonomy
The Qilian Mountains is located across the northeastern Qinghai and western Gansu provinces (35°50'–39°19'N, 94°10'–103°04'E) at elevations ranging from 4000 to 6000 m. The area has a temperate climate with mean annual precipitation around 400 mm. Forests are composed mainly of mixed broad-leaf and coniferous trees. The Qilian Mountain National Nature Reserve, where ascomycetes were surveyed, is extremely diverse in climate, vegetation, and geographic structure. Previous investigations of fungal resources have mainly focused on Basidiomycota (
The order Hypocreales includes about 2700 species in 240 genera, which are divided into 12 families (
Studies on fungi of this group in China dates back to 1895 when Trichoderma cornu-damae (Pat.) Z.X. Zhu & W.Y. Zhuang (as Hypocrea cornu-damae Pat.) was reported on rotten wood in Sichuan Province (
Specimens were collected from the Qilian Mountains in Gansu Province, and they are deposited in the Herbarium Mycologicum Academia Sinica (
Genomic DNA was extracted from dry specimens or fresh mycelia following the method of
Newly obtained sequences and those retrieved from GenBank are listed in Tables
List of Stylonectria species and the relatives, herbarium/strain numbers and GenBank accession numbers of materials used in this study.
Species | Herbarium/strain numbers | GenBank accession numbers | ||
---|---|---|---|---|
ACL1 | ITS | RPB2 | ||
Albonectri rigidiuscula (Berk. & Broome) Rossman & Samuels | CBS 122570 | HQ897896 | HQ897815 | HQ897760 |
Clonostachys rosea (Preuss) Mussat | CML817/CBS 114056 | KX184866 | KC806254 | DQ522415 |
Cyanonectria cyanostoma (Sacc. & Flageolet) Samuels & P. Chaverri | CBS 101734 | HQ897895 | FJ474076 | HQ897759 |
Dialonectria episphaeria (Tode) Cooke | CBS 125494 | HQ897892 | HQ897811 | HQ897756 |
Fusarium sambucinum Fuckel | CBS 14695 | KM231015 | KM231813 | KM232381 |
Fusicolla matuoi (Hosoya & Tubaki) Gräfenhan & Seifert | CBS 58178 | HQ897858 | KM231822 | HQ897720 |
Geejayessia cicatricum (Berk.) Schroers | CBS 125552 | HQ728171 | HQ728145 | HQ728153 |
Macroconia leptosphaeriae (Niessl) Gräfenhan & Schroers | CBS 100001 | HQ897891 | HQ897810 | HQ897755 |
Microcera coccophila Desm. | CBS 31034 | HQ897843 | HQ897794 | HQ897705 |
Neocosmospora vasinfecta E.F. Sm. | CBS 32554 | KM231005 | KM231803 | KM232370 |
Stylonectria applanata Höhn. | CBS 125489 | HQ897875 | HQ897805 | HQ897739 |
Stylonectria carpini Gräfenhan | DAOM 235819 | HQ897909 | HQ897823 | HQ897773 |
Stylonectria norvegica Lechat, J. Fourn. & Nordén | CBS 139239 | – | NR154415 | – |
Stylonectria purtonii (Grev.) Gräfenhan | DAOM 235818 | HQ897919 | HQ897831 | HQ897783 |
Stylonectria qilianshanensis Z.Q. Zeng & W.Y. Zhuang |
|
MT087289 a | MT084413 | MT087288 |
Stylonectria wegeliniana (Rehm) Gräfenhan, Voglmayr & Jaklitsch | CBS 125490 | HQ897890 | KM231817 | HQ897754 |
Trichoderma parareesei Atan., Jaklitsch, Komoń-Zel., C.P. Kubicek & Druzhin. | CBS 125925 | KJ665112 | MH863773 | HM182963 |
List of Trichoderma species, herbarium/strain numbers, and GenBank accession numbers of specimens used in this study.
Species | Herbarium/strain numbers | GenBank accession numbers | |
---|---|---|---|
RPB2 | TEF1 | ||
Hypocrella discoidea (Berk. & Broome) Sacc. | BCC 8237 | DQ452461 | – |
Hypocrella nectrioides Thaxt. |
GJS 8910 | DQ522448 | – |
Trichoderma alutaceum Jaklitsch | CBS 120535 | FJ179600 | FJ179567 |
CBS 33269 | FJ179601 | FJ179568 | |
Trichoderma gansuanum Z.Q. Zeng & W.Y. Zhuang |
|
MT087287 a | MT095060 |
Trichoderma gelatinosum P. Chaverri & Samuels | CPK 1618 | FJ179604 | FJ179569 |
Trichoderma leucopus Jaklitsch | CBS 122495 | FJ179606 | FJ179570 |
CBS 122499 | FJ179605 | FJ179571 | |
Trichoderma lixii (Pat.) P. Chaverri | CPK 1934 | FJ179608 | FJ179573 |
Trichoderma minutisporum Bissett | CBS 121276 | FJ179610 | FJ179574 |
Trichoderma nybergianum (T. Ulvinen & H.L. Chamb.) Jaklitsch & Voglmayr | CBS 122496 | FJ179612 | FJ179576 |
CBS 122500 | FJ179611 | FJ179575 | |
Trichoderma parapiluliferum (B.S. Lu, Druzhin. & Samuels) Jaklitsch & Voglmayr | CBS 20921 | FJ179614 | FJ179578 |
Trichoderma pezizoides (Berk. & Broome) Samuels, Jaklitsch & Voglmayr | GJS 01257 | EU248608 | AY937438 |
Trichoderma piluliferum J. Webster & Rifai | CBS 120927 | KJ842159 | FJ860674 |
Trichoderma placentula Jaklitsch | CBS 120924 | FJ179616 | FJ179580 |
Trichoderma polysporum (Link) Rifai | CPK 3131 | FJ860558 | FJ860661 |
Trichoderma poronioideum (Möller) Samuels | GJS 01203 | – | KP109823 |
Trichoderma seppoi Jaklitsch | CBS 122497 | FJ179618 | FJ179582 |
CBS 122498 | FJ179617 | FJ179581 | |
Trichoderma strictipile Bissett | CPK 1601 | FJ860594 | FJ860704 |
To determine taxonomic positions of the Hypomyces collections, sequences of ITS and 28S rDNA were searched against the NCBI GenBank database using BLASTN. Sequence comparisons showed that
To place the Stylonectria specime n within a phylogenetic context, sequences of ACL1, ITS, and RPB2 regions from 15 species of the genus and relatives were analyzed using BI and MP methods. Clonostachys rosea (Preuss) Mussat and Trichoderma parareesei Atan., Jaklitsch, Komoń-Zel., C.P. Kubicek & Druzhin. were used as outgroup taxa. The partition homogeneity test (PHT) (P = 0.01) indicated that the individual partitions were not highly incongruent (
To place the Trichoderma collections with clavate fruit bodies within a phylogenetic context, the sequences of RPB2 and TEF1 from 15 species of the genus were analyzed using BI and MP. Hypocrella discoidea (Berk. & Broome) Sacc. and Hypocrella nectrioides Thaxt. were used as outgroup taxa. The PHT (P = 0.01) indicated that the individual partitions were not highly incongruent (
China. Gansu Province, Wuwei, Chashugou, on decayed fruitbodies of an ascomycete on bark of Picea asperata, 26 August 2018, Z.Q. Zeng, X.C. Wang & H.D. Zheng 12155 (
China. Zhangye, Longchanghe, on decayed fruitbodies of an ascomycete on bark of Picea asperata, 24 August 2018, Z.Q. Zeng, X.C. Wang & H.D. Zheng 12016, 12017 (
The specific epithet refers to the type locality.
Perithecia gregarious, up to 30 in a group, parasitic on decayed fruitbodies of an ascomycete, deep red to dark red, turning black red in 3% KOH and light yellow in 100% LA, subglobose to globose, not becoming cupulate upon drying, (216–)255–344 × (186–)206–304 μm (n = 12), apex broadly discoid, flattened, 50–70 μm high, 160–220 μm in diameter, slightly constricted below, with a tiny papilla. Perithecial wall of two layers, 25–38 μm thick, outer layer 20–31 μm, of textura angularis, cells 5–8 × 2–4 μm, walls 0.8–1.0 μm thick; inner layer 5–7 μm, of textura prismatica, cells 8–12.5 × 3–5 μm, walls 0.5–0.8 μm thick. Asci clavate, with an apical ring, 8-spored, 55–88 × 5–8(–10) μm. Ascospores ellipsoidal, ends rounded, 1-septate, light brown, smooth, uniseriate, 10–13 × 5–5.5 μm. Asexual state unknown.
China.
Stylonectria qilianshanensis is morphologically similar to S. wegeliniana in having the perithecia with a broad, discoid apex, clavate asci with an apical ring, and ellipsoidal ascospores with rounded ends (
China. Gansu Province, Shandan, Yanzhishan, on mossy humus, 25 August 2018, Z.Q. Zeng, H.D. Zheng & X.C. Wang 12100 (
China. Gansu Province, Shandan, Yanzhishan, on mossy humus, 25 August 2018, Z.Q. Zeng, H.D. Zheng 12043, 12044 (
The specific epithet refers to the type locality.
Stromata simple, rare dichotomously branched, clavate, 20–54 mm long. Fertile part clavate, 5–18 mm long, 1.2–4 mm wide at apex, only slightly broader than stipe, distinctly laterally compressed or longitudinally furrowed, gradually tapered downwards, reddish brown to brownish orange, KOH+; sterile part 15–36 mm long, 1–3 mm wide, beige to cream KOH+. Stromatal surface slight tuberculate from papillate perithecial elevations. Ostiolar openings visible, 30–58 μm high. In section, cortical tissue of textura angularis,15–35 μm thick, cells hyaline to light yellow, 5–15 × 2–3 μm; subcortical tissue of textura angularis, 8–28 μm thick, cell hyaline to light yellow, 8–15 × 3–5 μm; subperithecial tissue of textura epidermoidea, rare textura angularis, cells hyaline to light yellow. Perithecia globose to subglobose, 196–206 × 167–235 μm; peridium 8–18 μm thick at flanks, 9–20 μm thick at the base. Papilla prominent, blunt or truncate, brown, 15–35 μm high, 18–43 μm wide at the base. Asci subcylindrical, 50–80 × 3–4 μm. Part-ascospores green, spinulose, dimorphic, distal cells globose, rarely ellipsoidal, 2.5–4 × 2.5–4 μm; proximal cells ellipsoidal to oblong, 3–5.5 × 2.5–3 μm. Asexual state unknown.
Trichoderma gansuanum a fresh stroma b dry stroma c stromatal surface d color of stroma after rehydration e median section through stromata f cortical tissue in section g subperithecial tissues in section h perithecia in section i ascus with ascospores j–m ascus with part-ascospores a from
China.
Among the known stipitate species of Trichoderma, T. gansuanum resembles T. nybergianum in habitat and having simple, clavate, erect stromata, cylindrical asci and disarticulating ascospores (
China, Gansu Province, Wuwei, Tianzhu, on Helvella sp., 26 August 2018, X.C. Wang, Z.Q. Zeng & H.D. Zheng 12103 (
Canada, China, United States.
China, Gansu Province, Tianzhu, Zhuchacun, on Boletus sp., 27 August 2018, Z.Q. Zeng, H.D. Zheng & X.C. Wang 12206 (
Australia, Belgium, Canada, China, French, Japan, New Zealand, United Kingdom, United States.
China, Gansu Province, Shandan, Yanzhishan, on Lactarius sp., 25 August 2018, Z.Q. Zeng, H.D. Zheng & X.C. Wang 12060, 12061 (
Austria, Belgium, Canada, China, Czech, Denmark, Finland, France, Germany, Italy, Mexico, New Zealand, Russia, Sweden, United Kingdom, United States.
China, Gansu Province, Tianzhu, Kelacun, on Agaricus sp., 27 August 2018, Z.Q. Zeng, H.D. Zheng & X.C. Wang 12222 (
ITS (MT676396) and LSU (MT669266).
China, France, Germany, United Kingdom.
China, Gansu Province, Shandan, Yanzhishan, on Lactarius sp., 25 August 2018, Z.Q. Zeng, H.D. Zheng & X.C. Wang 12056 (
ITS (MT676395).
China, Estonia, Poland, Ukraine, United States.
China, Gansu Province, Shandan, Yanzhishan, on Humaria sp., 25 August 2018, Z.Q. Zeng, H.D. Zheng & X.C. Wang 12063 (
Canada, China, Germany, United States.
China, Gansu Province, Zhangye, Minyue, on (?) Agaricus sp., August 2018, C.H. Dong & S.J. Li 12287 (
ITS (MT084414) and LSU (MT078664).
On MEA, colony radius 33 mm after 7d at 25 °C, velvet, surface white, reverse light brown; aerial hyphae white. On PDA, colony radius 20 mm after 7d at 25 °C, floccose, surface grey white, reverse light sienna; aerial hyphae white. Simple branches of aerial hyphae terminating in 1–2-verticillate conidiophores with terminal whorl of 2–4 phialides. Phialides subulate, tapering towards apex, smooth, 8–25 × 1.5–2 μm. Conidia ellipsoidal to rod-shaped, aseptate, hyaline, smooth, 2.5–8 × 1–3 μm. Chlamydospores globose, hyaline, smooth, 5–8 μm in diameter, rare ellipsoidal, 6–12 × 5–10 μm, formed singly or in chains in intercalary position.
Canada, China, Germany, New Zealand, The Netherlands, United States, Venezuela.
Hypomyces tremellicola is a new record for China. This species was originally described as Hypocrea tremellicola Ellis & Everh. (
China, Gansu Province, Tianzhu, Zhuchacun, on rotten twigs, 27 August 2018, Z.Q. Zeng, H.D. Zheng & X.C. Wang 12214 (
China, Japan.
China, Gansu Province, Shandan, Yanzhishan, on rotten twigs, 25 August 2018, Z.Q. Zeng, H.D. Zheng & X.C. Wang 12084 (
ITS from
China, France.
China, Gansu Province, Shandan, Yanzhishan, on rotten twigs of broadleaf tree, 25 August 2018, Z.Q. Zeng, H.D. Zheng & X.C. Wang 12085 (
ITS (MT676393) and LSU (MT669265).
Canada, China, France, Germany, United Kingdom, United States.
China, Gansu Province, Wuwei, Chashugou, on rotten twigs, 26 August 2018, Z.Q. Zeng, H.D. Zheng & X.C. Wang 12149 (
Chile, China, United Kingdom.
China, Gansu Province, Wuwei, Chashugou, on rotten twigs, 26 August 2018, Z.Q. Zeng, H.D. Zheng & X.C. Wang 12150, 12151, 12154 (
Canada, China, France, Germany, Italy, Japan, United States.
China, Gansu Province, Wuwei, Chengshanqizu, on rotten twigs of Populus sp., 28 August 2018, Z.Q. Zeng, H.D. Zheng & X.C. Wang 12285, 12286 (
ITS from
China.
China, Gansu Province, Zhangye, Dayekou, on mossy ground under Picea asperata, 3 September 1958, Q.M. Ma 890 (
Austria, China, Denmark, Finland, Germany, Japan, Sweden, United Kingdom, United States.
China, Gansu Province, Tianzhu, Haxi, on rotten twigs, 28 August 2018, Z.Q. Zeng, H.D. Zheng & X.C. Wang 12282 (
ITS (MT676391) and TEF1 (MT674562).
Austria, China, Colombia, France, Germany, Greece, Iran, Italy, Japan, Mexico, Spain, Switzerland, United States.
China, Gansu Province, Yongchang, in soil, April 2016, K. Chen TC896.
China, United States.
The genus Stylonectria, typified by S. applanata, was established as a monotypic genus by Höhnel (1915). It was included in Nectria by
For some nectriaceous fungi, substrate type was considered of taxonomic importance (
Gross morphology like stroma, ascospore features and asexual states were stressed for generic delimitations of the hypocrealean fungi. Species of Hypocreaceae possessing clavate to cylindrical, fleshy, bright-colored stromata were previously accommodated in Podostroma P. Karst. (
The authors thank Prof. Cai-Hong Dong and Drs Xin-Zhan Liu and Jun-Min Liang of Institute of Microbiology, CAS, for providing strain or collecting specimens jointly for this study. This work was supported by the National Natural Science Foundation of China (no. 31750001, 31870012, 31570018), Frontier Key Program of Chinese Academy of Sciences (no. QYZDY-SSW-SMC029) and Ecological restoration in the habitats of rare and endangered plants and animals as well as fungi protection and utilization in the Qilian Mountains (2018–20).