Research Article |
Corresponding author: Aku Korhonen ( aku.korhonen@helsinki.fi ) Academic editor: R. Henrik Nilsson
© 2018 Aku Korhonen, Jaya Seelan Sathiya Seelan, Otto Miettinen.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Korhonen A, Seelan JSS, Miettinen O (2018) Cryptic species diversity in polypores: Skeletocutis nivea species complex. MycoKeys 36: 45-82. https://doi.org/10.3897/mycokeys.36.27002
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We propose a taxonomic revision of the two closely related white-rot polypore species, Skeletocutis nivea (Jungh.) Jean Keller and S. ochroalba Niemelä (Incrustoporiaceae, Basidiomycota), based on phylogenetic analyses of nuclear ribosomal internal transcribed spacer (ITS) and translation elongation factor EF-1α sequences. We show that prevailing morphological species concepts of S. nivea and S. ochroalba are non-monophyletic and we delineate new species boundaries based on phylogenetic inference. We recognise eleven species within the prevailing species concept of S. nivea (S. calida sp. nov., S. coprosmae comb. nov., S. futilis sp. nov., S. impervia sp. nov., S. ipuletii sp. nov., S. lepida sp. nov., S. nemoralis sp. nov., S. nivea sensu typi, S. semipileata comb. nov., S. unguina sp. nov. and S. yuchengii sp. nov.) and assign new sequenced epitypes for S. nivea and S. semipileata. The traditional concept of S. ochroalba comprises two independent lineages embedded within the S. nivea species complex. The Eurasian conifer-dwelling species S. cummata sp. nov. is recognised as separate from the North American S. ochroalba sensu stricto. Despite comprehensive microscopic examination, the majority of the recognised species are left without stable diagnostic character combinations that would enable species identification based solely on morphology and ecology.
cryptic species, fungal taxonomy, Incrustoporiaceae , phylogenetic species, polypores
Species delimitation in macrofungi has traditionally been based on morphology of fruiting bodies. Yet, their structure is often relatively simple and taxonomically useful characters are scarce. Even with rigorous microscopic inspection of hyphal structures and spores, true species diversity in macrofungi appears to be concealed by limited morphological resolution.
In polypores (a form group of primarily wood-decaying Basidiomycota with poroid hymenophores), numerous DNA-based studies have reported unaccounted species diversity within previously recognised morphospecies: e.g. Antrodia crassa (
A handful of studies have documented morphologically indistinguishable, cryptic species diversity, for instance, in the fleshy fungus Sparassis crispa (
Morphological resolution is of significance when we need to link old names and unsequenced historical specimens to modern species concepts. In these cases, the question about morphologically indistinguishable, cryptic species becomes relevant.
Here, we demonstrate previously unrecognised cryptic diversity in a polypore species complex comprising the morphospecies Skeletocutis nivea (Jungh.) Jean Keller and S. ochroalba Niemelä in the family Incrustoporiaceae Jülich (Polyporales, Basidiomycota). Despite in-depth morphometrics, extensive material and the best of our expertise, we have not been able to find reliable morphological differences between most species in this complex. Species identification is thus reliant on DNA markers only and we have taken the necessary step to provide sequenced types for all known taxa whenever possible.
According to the prevailing, morphology-based circumscription, S. nivea is a cosmopolitan white-rot polypore species, distributed in tropical and temperate zones on both hemispheres, growing on dead angiosperm wood. S. nivea was originally described from the Island of Java (Indonesia) (
S. ochroalba, described from boreal North America (
In this study, we resolve the diversity within the S. nivea complex by phylogenetic analyses of two genetic markers, viz. the nuclear ribosomal internal transcribed spacer (ITS) region and the translation elongation factor EF-1α (tef1), complemented by microscopic study of specimens. We have sampled S. nivea and S. ochroalba widely over their known distributions and combine our newly generated data with previously published sequences. Based on our results, we propose a taxonomic revision of the S. nivea complex.
In total, 92 ITS and 33 tef1 DNA sequences were generated for this study. In addition, we included sequences publicly available in the International Nucleotide Sequence Database Collaboration database (INSDC). To elucidate the relationship of the S. nivea complex to other taxa in the family Incrustoporiaceae, we also amplified the nuclear large subunit (LSU) region of the rRNA operon from representatives of the S. nivea complex and retrieved LSU sequences of relevant outgroup taxa from the INSDC. LSU is highly conserved within the S. nivea complex but enables comparisons to more distantly related taxa. All of the newly generated sequences were deposited in the INSDC. Voucher data for all included sequences are provided in Suppl. material
DNA was extracted from dried herbarium samples of basidiocarps and mycelia from agar cultures using the E.Z.N.A. Forensic DNA kit (Omega Bio-tek). Pieces of the sample were cut out with a scalpel and then homogenised with a mortar and pestle in a 1.5 ml centrifuge tube. Further steps were performed according to the kit manufacturer’s protocol.
The primers ITS5 and ITS4 (White et al. 1990) were used for amplifying and sequencing the ITS1–5.8S–ITS2 region of the nuclear rRNA operon. The primers EF1-983.2f (5’-GCH YCH GGN CAY CGT GAY TTY AT-3’) (modified from
Polymerase chain reactions (PCRs) were carried out with either the Illustra PureTaq Ready-To-Go PCR Beads (GE Healthcare), DreamTaq Green PCR mix (Thermo Scientific) or Phire Tissue Direct PCR Master Mix (Thermo Scientific). A touchdown style PCR programme (designed by Zheng Wang http://wordpress.clarku.edu/polypeet/datasets/primer-information/) was applied for tef1 amplification. The resulting products were sequenced with BigDye v.3.1 and ABI3730XL analyser (Applied Biosystems) by Macrogen and FIMM. The electropherograms of forward and reverse sequences were aligned against each other using Sequencher v. 5.0 (Gene Codes Corporation). The aligned electropherograms were then visually inspected to ensure good sequence quality and ambiguous sequence reads were discarded. Double peaks were interpreted as true base ambiguities when they were detected in both forward and reverse sequencing electropherograms.
For an outgroup analysis, a combined ITS–LSU dataset was assembled with representatives of the S. nivea complex (18 sequences) and outgroups (14 sequences from 11 species). The resulting trees were rooted with Tyromyces merulinus (a possible sister to Incrustoporiaceae) following
Sequences were aligned using PRANK v.140603 (
Phylogenetic trees were constructed using the maximum likelihood (ML) and Bayesian inference (BI) methods. ML trees were reconstructed with RAxML 8.2.10 (
Analysis | Gene | Partition in model estimation | Model selected for Bayesian analysis | Sub-partition | Length in alignment | Number of parsimony informative sites in alignment |
---|---|---|---|---|---|---|
outgroup | nrRNA | ITS1 and ITS2 | GTR+G | ITS1 | 215 | 62 |
ITS2 | 206 | 67 | ||||
5.8S and LSU | K80+G | 5.8S | 154 | 8 | ||
LSU | 1460 | 91 | ||||
ingroup | ITS1 and ITS2 | HKY+G | ITS1 | 257 | 57 | |
ITS2 | 262 | 73 | ||||
5.8S | K80 | 154 | 0 | |||
tef1 | 1. codon position | F81+G | 231 | 13 | ||
2. codon position | JC+G | 231 | 11 | |||
3. codon position | HKY+G | 231 | 87 | |||
introns | HKY+I | 188 | 79 |
The substitution models for BI were selected for each partition (Table
BI analyses were performed in MrBayes v.3.2.6 (
All analyses were performed through the Cipres Science Gateway v.3.3 interface (
The numbers of base substitutions per site within and between the inferred species were calculated in MEGA v.7.0.25 (
The majority of studied materials are dried specimen collections stored in herbarium H (Helsinki). Type material and reference specimens from herbaria BPI, H, L, O and PDD were also studied. Herbarium acronyms are given according to
Pore measurements (12 per specimen) were done under a stereomicroscope (Wild M54) by counting the number of pores per 1 mm; only pores aligned in straight rows were selected for this purpose. Microscopic structures were studied and measured with Leitz Diaplan and Leica DMBL microscopes (×1250 magnification). Microscopic routines used in this study follow
In microscopic descriptions, the following abbreviations are used: L – mean spore length; W – mean spore width; Q – mean L/W ratio; n – pore counts, spores or hyphae measured / number of specimens. For presenting a variation of basidiospores and hyphae, 5% of measurements were excluded from each end of the range and are given in parentheses. The respective cut-off for reported pore measures is 20%.
Intragenomic variation of ITS sequences, as discussed by
Phylogenetic analyses of the ITS–LSU dataset (Fig.
Phylogenetic tree from ML analysis of the ITS–LSU dataset. Bootstrap support values (up to 100) and respective Bayesian posterior probabilities (up to 1) are shown beside branches (bs / pp) where bs > 50 or pp ≥0.80. Terminal labels include INSDC accession number(s), species name, (area of origin, in ISO 3166 code) and gene regions included. * = sequence retrieved from the INSDC.
Some segments of ITS sequences proved difficult to align unequivocally even within the S. nivea complex. While the composition of the clades which we interpret as species was not affected, the topologies of deeper nodes were found to be somewhat sensitive to small adjustments of the alignment in those variable segments.
Despite partially contrasting topology of inter-group relationships, the phylogenetic analyses of both tef1 (Fig.
Phylogenetic tree from ML analysis of the tef1 dataset. Bootstrap support values (up to 100) and respective Bayesian posterior probabilities (up to 1) are shown beside branches (bs / pp) for all nodes that delimit species and for deeper nodes where bs >50 or pp ≥0.95. Terminal labels include INSDC accession number, species name, area of origin (in ISO 3166 code) and indication of type status. * = sequence retrieved from the INSDC.
Phylogenetic tree from ML analysis of the ITS dataset. Bootstrap support values (up to 100) and Bayesian posterior probabilities (up to 1) are shown beside branches (bs / pp) for all nodes that delimit species and deeper nodes where bs >50 or pp ≥0.95. Terminal labels include INSDC accession number, species name, area of origin (in ISO 3166 code), host tree and indication of type status. * = sequence retrieved from the INSDC. ** = tef1 sampled from corresponding specimen. (A) All terminals shown except Skeletocutis semipileata; (B) terminals within S. semipileata.
All recognised species were strongly supported in the analyses of the tef1 dataset. Corresponding support from the ITS data was strong for all but S. nivea, which lacks true synapomorphic characters in relation to S. lepida and S. yuchengii in that genetic marker.
Average estimated intraspecific sequence divergence in the ITS dataset was up to 0.32% (SE=0.12) (in S. nivea) and in the tef1 dataset up to 4.2% (SE=0.8) (in S. yuchengii). Average estimated genetic distances between species varied from 1.3% (SE=0.4) between S. lepida and S. nivea, to 10.3% (SE=1.1) between S. calida and S. aff. futilis in the ITS dataset and from 3.7% (SE=0.7) between S. impervia and S. lepida, to 16.9% (SE=2.1) between S. futilis and S. ochroalba in the tef1 dataset. The genetic divergence within and between species was generally higher in tef1 than ITS sequences. The full set of estimates of genetic divergence between and within species is provided in Suppl. materials
Morphometrics for each species are reported in Table
Pore and spore measurements of species in the Skeletocutis nivea complex. Spore measures in bold-face are accumulated statistics from specimens below.
Specimen | Pores/mm (min–median–max) | n | Spore length (µm) | L | Spore width (µm) | W | Q’ | Q | n |
---|---|---|---|---|---|---|---|---|---|
Skeletocutis calida sp. nov. | 2.5–3.1(–3.3) | 2.86 | 0.5–0.6(–0.7) | 0.55 | (4.0–)4.3–6.0(–6.9) | 5.18 | 60/2 | ||
holotype | 8–9–10 | 12 | 2.8–3.0 | 2.92 | 0.5–0.6(–0.7) | 0.56 | (4.3–)4.8–5.8(–6.0) | 5.22 | 30 |
Miettinen 17466 | 8–9–11 | 12 | 2.5–3.2(–3.3) | 2.79 | 0.5–0.7 | 0.54 | (4.0–)4.2–6.4(–6.9) | 5.13 | 30 |
S. coprosmae comb. nov. | 2.8–3.2(–3.3) | 2.98 | 0.5–0.7 | 0.57 | (4.0–)4.3–6.0(–6.4) | 5.19 | 60/2 | ||
holotype | 6–8–9 | 12 | 2.8–3.2(–3.3) | 3 | 0.5–0.7 | 0.57 | 4.3–6.2(–6.4) | 5.3 | 30 |
Gates 1898 | 7–8–9 | 12 | 2.8–3.1 | 2.95 | 0.5–0.7 | 0.58 | (4.0–)4.3–6.0 | 5.09 | 30 |
S. cummata sp. nov. | (2.8–)2.9–3.4(–3.9) | 3.1 | 0.5–0.8(–0.9) | 0.66 | (3.3–)3.8–6.0(–6.6) | 4.68 | 270/9 | ||
holotype | 5–6–7 | 12 | 2.9–3.3 | 3.05 | 0.6–0.8(–0.9) | 0.74 | (3.3–)3.6–5.2(–5.5) | 4.14 | 30 |
Niemelä 9088 | 6–7–8 | 12 | 3.0–3.3(–3.5) | 3.09 | 0.6–0.7 | 0.66 | 4.3–5.3 | 4.71 | 30 |
Spirin 3857 | 7–8–9 | 12 | (2.9–)3.0–3.9 | 3.13 | 0.5–0.8 | 0.63 | 4.3–6.0 | 4.94 | 30 |
Spirin 4170 | 7–9 | 12 | 2.9–3.7(–3.9) | 3.18 | 0.5–0.7(–0.8) | 0.58 | 4.4–6.4(–6.6) | 5.48 | 30 |
Spirin 4897 | 6–7–8 | 12 | 2.8–3.4(–3.5) | 3.05 | 0.5–0.7 | 0.6 | (4.1–)4.3–6.0 | 5.11 | 30 |
Spirin 5430 | 5–6–8 | 12 | 3.0–3.4 | 3.1 | 0.5–0.8 | 0.66 | (3.9–)4.0–6.0 | 4.68 | 30 |
Spirin 5472 | 6–7.5–9 | 12 | 3.0–3.4(–3.5) | 3.09 | 0.6–0.8(–0.9) | 0.74 | 3.8–5.0 | 4.18 | 30 |
Spirin 5484 | 7–10–13 | 12 | 2.9–3.2(–3.3) | 3.05 | 0.6–0.8 | 0.67 | 3.6–5.2(–5.3) | 4.52 | 30 |
Spirin 5676 | 7–9 | 12 | 2.8–3.4(–3.5) | 3.12 | 0.6–0.8 | 0.67 | (3.5–)3.9–5.7 | 4.63 | 30 |
S. futilis sp. nov. | 6–7–8 | 9 | 3.0–4.0 | 3.33 | 0.7–0.9 | 0.81 | (3.3–)3.4–5.1 | 4.13 | 30 |
S. impervia sp. nov. | 7–8.5–10 | 12 | (2.8–)2.9–3.1 | 2.97 | 0.5–0.8 | 0.61 | (3.6–)3.8–6.0(–6.2) | 4.85 | 30 |
S. ipuletii sp. nov. | 9–10–11 | 12 | 2.8–3.4 | 2.96 | 0.5–0.7(–0.8) | 0.6 | (4.0–)4.1–6.0(–6.2) | 4.97 | 30 |
S. lepida sp. nov. | (2.8–)2.9–3.0(–3.1) | 2.95 | 0.5–0.6 | 0.55 | 4.8–6.0 | 5.36 | 90/3 | ||
holotype | 7–8–9 | 12 | 2.9–3.1 | 2.98 | 0.5–0.6 | 0.54 | 4.8–6.0 | 5.55 | 30 |
Spirin 4989 | 7–9–10 | 12 | (2.8–)2.9–3.0 | 2.94 | 0.5–0.6 | 0.56 | 4.8–6.0 | 5.22 | 30 |
Spirin 3964 | 7–9–10 | 12 | 2.8–3.0 | 2.93 | 0.5–0.6 | 0.55 | 4.8–6.0 | 5.3 | 30 |
S. nemoralis sp. nov. | (2.8–)2.9–3.2(–4.0) | 3.04 | (0.4–)0.5–0.6(–0.7) | 0.56 | (4.1–)4.8–6.3(–7.8) | 5.47 | 390/13 | ||
holotype | 6–7.5–9 | 12 | 2.9–3.2(–3.3) | 3.06 | 0.5–0.7 | 0.57 | 4.3–6.2 | 5.4 | 30 |
Brandrud 149–04 | 7–8–9 | 12 | (2.9–)3.0–3.4(–3.8) | 3.13 | 0.4–0.7 | 0.55 | (4.6–)4.9–7.2(–7.5) | 5.66 | 30 |
Gaarder 5257 | 8–8.5–9 | 12 | (2.9–)3.0–3.8(–4.0) | 3.17 | (0.4–)0.5–0.7 | 0.57 | (4.6–)4.7–6.7(–7.5) | 5.59 | 30 |
Klepsland JK06–S080 | 7–8–9 | 12 | 2.8–3.0(–3.2) | 2.94 | 0.5–0.7 | 0.57 | 4.1–6.0 | 5.16 | 30 |
Korhonen 28 | 7–8–9 | 12 | 2.9–3.1(–3.3) | 3.02 | 0.4–0.6(–0.7) | 0.54 | (4.7–)4.8–7.2(–7.8) | 5.56 | 30 |
Korhonen 31 | 6–7–9 | 12 | 2.9–3.1(–3.5) | 3.02 | 0.5–0.7 | 0.58 | 4.3–6.0(–6.2) | 5.18 | 30 |
Korhonen 35 | 7–7–8 | 12 | (2.8–)2.9–3.2(–3.3) | 3.06 | 0.5–0.6 | 0.54 | (4.8–)5.0–6.4(–6.6) | 5.71 | 30 |
Korhonen 83 | 6–8–9 | 12 | 2.9–3.1 | 3 | 0.5–0.6(–0.7) | 0.55 | (4.3–)4.8–6.2 | 5.46 | 30 |
Korhonen 86 | 7–8–10 | 12 | 2.9–3.1 | 3 | 0.5–0.6 | 0.57 | 4.8–6.0(–6.2) | 5.3 | 30 |
Korhonen 89 | 7–8–9 | 12 | 2.9–3.1(–3.2) | 3.05 | 0.5–0.6 | 0.56 | 4.8–6.2 | 5.45 | 30 |
Korhonen 93 | 6–7–8 | 12 | 3.0–3.1 | 3.05 | 0.4–0.6 | 0.53 | 5.0–7.5(–7.8) | 5.79 | 30 |
Korhonen 100 | 7–8 | 12 | 2.9–3.1(–3.2) | 3.02 | 0.5–0.6 | 0.56 | 4.8–6.2 | 5.43 | 30 |
Korhonen 103 | 6–7–8 | 12 | (2.8–)2.9–3.2(–3.8) | 3.04 | (0.4–)0.5–0.6 | 0.55 | (4.7–)4.8–6.4(–7.2) | 5.52 | 30 |
S. nivea | (2.7–)2.8–3.2(–3.7) | 2.96 | 0.5–0.7(–0.8) | 0.56 | (3.9–)4.3–6.0(–6.2) | 5.27 | 125/5 | ||
holotype | 8–10–13 | 5 | – | – | – | – | – | – | – |
epitype | 8–10–11 | 12 | (2.7–)2.8–3.4(–3.7) | 2.96 | 0.5–0.7(–0.8) | 0.56 | (4.3–)4.4–6.0 | 5.32 | 30 |
Miettinen 10579.1 | 7–8–9 | 12 | 2.7–3.0 | 2.91 | 0.5–0.7 | 0.57 | (3.9–)4.0–6.0 | 5.08 | 30 |
Miettinen 18255 | – | – | 3.0–3.2 | 3.12 | 0.5–0.6 | 0.56 | 5.2–6.2 | 5.57 | 5 |
Miettinen 16350 | 9–10–11 | 12 | 2.7–3.1 | 2.91 | 0.5–0.7 | 0.55 | 4.3–6.2 | 5.33 | 30 |
Ryvarden 38177 | 7–8–10 | 12 | 2.8–3.5(–3.7) | 3.02 | 0.5–0.7 | 0.57 | (4.1–)4.3–6.0 | 5.3 | 30 |
S. ochroalba | (2.8–)2.9–3.7(–4.0) | 3.1 | 0.5–0.8 | 0.67 | 3.8–6.0(–7.0) | 4.65 | 70/3 | ||
Niemelä 2689 | 6–7.5–9 | 12 | 2.9–3.7(–4.0) | 3.1 | (0.5–)0.6–0.8 | 0.67 | (3.8–)4.1–5.2(–7.0) | 4.63 | 35 |
Spirin 8854a | 6–7–9 | 22 | (2.8–)2.9–3.2(–3.3) | 3.04 | 0.5–0.8 | 0.67 | 3.8–6.0(–6.2) | 4.56 | 30 |
Spirin 8854b | 7–8–10 | 9 | 3.2–3.8 | 3.48 | 0.6–0.7 | 0.66 | 4.7–5.5 | 5.27 | 5 |
S. semipileata comb. nov. | (2.3–)2.8–3.1(–3.3) | 2.97 | 0.4–0.6(–0.7) | 0.55 | (4.1–)4.7–7.0(–7.5) | 5.43 | 450/15 | ||
lectotype | 8–8.5–11 | 10 | – | – | – | – | – | – | – |
epitype | 7–8–10 | 12 | 2.8–3.1 | 2.98 | 0.5–0.7 | 0.57 | 4.4–6.0 | 5.22 | 30 |
Gaarder 5136 | 7–8–10 | 12 | (2.8–)2.9–3.1(–3.3) | 2.98 | 0.5–0.7 | 0.58 | (4.1–)4.4–6.0 | 5.17 | 30 |
Korhonen 76 | 7–9–10 | 12 | (2.6–)2.8–3.1 | 2.98 | 0.4–0.6(–0.7) | 0.53 | (4.1–)4.8–7.2 | 5.62 | 30 |
Miettinen 6694 | 7–8–10 | 12 | (2.7–)2.8–3.2 | 2.97 | 0.5–0.6 | 0.58 | 4.8–6.0 | 5.16 | 30 |
Miettinen 14114 | 7–8–10 | 12 | 2.8–3.0(–3.1) | 2.94 | 0.5–0.6 | 0.56 | 4.8–6.0 | 5.28 | 30 |
Miettinen 14917.4 | 8–9–10 | 12 | (2.8–)2.9–3.1 | 3 | (0.4–)0.5–0.6 | 0.55 | (4.7–)4.8–6.2(–7.5) | 5.42 | 30 |
Miettinen 15715 | 8–8–9 | 12 | (2.3–)2.4–3.0 | 2.79 | (0.4–)0.5–0.6 | 0.53 | (4.5–)4.6–5.8(–7.0) | 5.26 | 30 |
Miettinen 15835 | 8–9–11 | 12 | (2.8–)2.9–3.2(–3.3) | 3.02 | (0.4–)0.5–0.6 | 0.54 | 5.0–6.2(–7.0) | 5.56 | 30 |
Miettinen 16693.1 | 8–8–9 | 12 | 2.9–3.2(–3.3) | 3.01 | 0.4–0.6(–0.7) | 0.52 | (4.3–)4.8–7.5 | 5.75 | 30 |
Miettinen 16823 | 8–9–11 | 12 | 2.8–3.0 | 2.93 | 0.4–0.6 | 0.49 | 4.8–7.5 | 5.93 | 30 |
Miettinen 17074 | 8–9–11 | 12 | 2.8–3.0 | 2.93 | 0.4–0.7 | 0.56 | (4.1–)4.3–7.2 | 5.27 | 30 |
Miettinen 17135 | 7–9–10 | 12 | 2.9–3.0(–3.1) | 2.99 | (0.4–)0.5–0.6 | 0.54 | 5.0–6.0(–7.5) | 5.5 | 30 |
Ryvarden 47279 | 7–8–10 | 12 | 2.9–3.1 | 3.02 | 0.5–0.7 | 0.58 | (4.3–)4.4–6.0(–6.2) | 5.21 | 30 |
Spirin 2326 | 7–8–9 | 12 | 2.8–3.1 | 2.96 | 0.4–0.6 | 0.53 | (4.7–)4.8–7.0(–7.2) | 5.59 | 30 |
Spirin 5142 | 8–8–10 | 12 | 2.9–3.0(–3.1) | 2.98 | 0.4–0.6 | 0.53 | (4.8–)5.0–7.2 | 5.59 | 30 |
S. unguina sp. nov. | 7–8–9 | 12 | 2.9–3.2(–3.3) | 3.04 | (0.4–)0.5–0.6(–0.7) | 0.55 | (4.6–)4.8–6.4(–7.5) | 5.49 | 30 |
S. yuchengii sp. nov. | (2.7–)2.8–3.1(–3.2) | 2.96 | (0.4–)0.5–0.7 | 0.59 | (4.0–)4.1–6.0(–7.2) | 4.99 | 90/3 | ||
holotype | 8–8.5–11 | 12 | (2.8–)2.9–3.2 | 3.01 | 0.5–0.7 | 0.62 | (4.0–)4.1–6.0(–6.4) | 4.86 | 30 |
Miettinen 10150.2 | – | – | 2.7–3.1 | 2.93 | 0.5–0.7 | 0.59 | (4.0–)4.1–6.0(–6.2) | 5 | 30 |
Miettinen 10366.1 | 8–9–11 | 12 | (2.8–)2.9–3.0(–3.1) | 2.95 | (0.4–)0.5–0.7 | 0.58 | (4.0–)4.1–6.0(–7.2) | 5.11 | 30 |
Distribution, ecology and habit of species in the Skeletocutis nivea complex.
Host | Species | Distribution | Characteristics and ecology |
---|---|---|---|
angiosperm | Skeletocutis calida sp. nov. | subtropical N America | annual; basidiocarps small individual pilei; on fallen twigs |
S. coprosmae comb. nov. | Tasmania, New Zealand | potentially perennial; basidiocarps becoming large and sturdy when growing on coarse wood | |
S. futilis sp. nov. | Finland | annual; basidiocarps small; spores over 0.7 µm thick; on fallen twigs | |
S. impervia sp. nov. | Uganda | likely annual | |
S. ipuletii sp. nov. | Uganda | likely annual | |
S. lepida sp. nov. | temperate East Asia (Russian Far East, Japan) | annual; basidiocarps small individual pilei when growing on thin branches, sturdier on coarse wood | |
S. nemoralis sp. nov. | temperate Eurasia | annual; basidiocarps often sturdy and large; on fallen branches; prefers Fraxinus | |
S. nivea | China, SE Asia, New Zealand | annual; basidiocarps potentially quite large; on fallen branches or logs | |
S. semipileata comb. nov. | temperate – south-boreal northern hemisphere | annual; basidiocarps often quite large; on fallen twigs, branches or logs of various woody angiosperms | |
S. unguina sp. nov. | China (Yunnan) | annual; basidiocarps small individual pilei; on fallen twigs | |
S. yuchengii sp. nov. | China (Yunnan) | annual; basidiocarps small; on fallen twigs | |
conifer | S. cummata sp. nov. | (oro)boreal Eurasia | annual; basidiocarps small, pileus surface and margin slightly pubescent; on downed conifer logs, usually Picea |
S. ochroalba | boreal N America | potentially perennial; basidiocarps small, pileus surface and margin slightly pubescent; on downed logs of Picea |
Interspecies relationships were not clearly resolved by our data and analyses of the ITS and tef1 datasets resulted in partially contrasting topologies. Skeletocutis futilis (together with S. aff. futilis) and S. calida represent long, divergent branches which are consistently positioned as early diverging lineages in our analyses. However, the position of S. calida was found to be sensitive to slight alterations of alignment in some variable segments of ITS, alternative positions being within the crown group.
The crown group is characterised by relatively short internodes and poor interspecies resolution. However, S. lepida, S. nivea and S. yuchengii were consistently grouped together. Weak support (bs=9, pp=0.30) for S. nivea in the ITS data could be explained by incomplete lineage sorting in this genetic marker after relatively recent speciation. The loss of ancestral alleles can be expected to be slower in the widely distributed S. nivea, which probably comprises a larger population than the regionally endemic S. lepida or S. yuchengii.
Despite their ecological and morphological similarities, the conifer-dwelling species S. cummata and S. ochroalba were recovered as sister species only in the Bayesian analysis of the ITS–LSU dataset. Even then, the support was minimal (pp=0.151).
Our results with the S. nivea complex are in line with other molecular systematic studies in Polyporales (e.g.
Our sampling is concentrated in the northern temperate zone, where most species of the S. nivea complex appear to be restricted to a single continent or region. This is in accordance with other comparable studies on polypores (e.g.
The greatest species diversity is found in Eurasia and particularly in East Asia with three species unique to the region: S. lepida in Northeast Asia and S. unguina and S. yuchengii in southern China. S. futilis is thus far known only from northern Europe but the closely related S. aff. futilis occurs in North America. S. cummata and S. nemoralis have continent-wide distributions in Eurasia.
North American species include S. calida in southern U.S.A. and S. aff. futilis in northern U.S.A. The conifer-dwelling S. ochroalba represents the North American parallel of the Eurasian S. cummata with boreal, continent-wide distribution.
Wide and disjunct distributions of species like S. semipileata, S. nivea and S. coprosmae indicate that species distributions are not necessarily limited by dispersal ability. Spores in the S. nivea complex are exceedingly small and their theoretical dispersal ability along air currents is practically unlimited (
The generalist ecology of S. semipileata may have facilitated its dispersal over the northern hemisphere, while some of the more restricted species may be limited by low establishment probability imposed by stricter specialisation. Geographic structuring within S. semipileata, particularly evident in the tef1 data – where differentiation between North America and Eurasia and furthermore East Asian and European populations emerges – suggests that gene flow across long distances in this species is somewhat restricted. Similarly, geographic isolation is likely driving the differentiation between S. futilis and S. aff. futilis, be that inter or intraspecific.
Our sampling from the low latitudes and southern hemisphere was sporadic but yielded a proportionately large number of species, most of which were represented by only one or a few specimens. Specimens collected from a relatively small area in Yunnan, southern China fall into three species, two of which (S. unguina and S. yuchengii) are known only from that area.
The only two African specimens, both from Uganda, proved to represent separate species, S. impervia and S. ipuletii. Another new species, S. afronivea Ryvarden, morphologically close to the S. nivea complex, was recently described from Uganda (
We anticipate that further studies are likely to reveal even more diversity within the S. nivea complex. Potential hotspot areas include the montane forests of the tropics as well as the temperate forests in mid-latitudes. For instance, Western North America and large parts of the southern hemisphere were not sampled in this study.
Ecologically, S. nivea complex can be divided into conifer-dwelling species (S. cummata and S. ochroalba) and angiosperm-dwelling species. The lack of support for a sister species relationship between S. cummata and S. ochroalba suggests that host switching may have happened more than once during the diversification of the S. nivea complex. Both S. cummata and S. ochroalba have remarkably similar fruiting body morphology characterised by small size, pileate form with pubescent pileus surface and the occasional salmon colour on the pore surface as well as spore dimensions that are distinct from most angiosperm-dwelling species. Better phylogenetic resolution of the S. nivea complex would be required to discern whether these shared traits represent homologies or independently derived ecological adaptations.
The host range of the conifer-dwelling species remains unresolved. They are most commonly found on logs of Picea, but S. cummata in the Russian Far East has been collected from Abies and Larix as well. We also studied a specimen from China (L. Ryvarden 21394 (H)), labelled as S. nivea from Pinus, but close inspection revealed the spores to be too small for S. cummata. The specimen was not sequenced so its true species identity remains unverified. In North America,
Several of the angiosperm-dwelling species are so far known only from one or a few specimens and detailed substrate data were often not available. Our records of S. lepida, S. nemoralis and S. semipileata suggest that individual species are able grow on a wide diversity of woody angiosperms. A preference for Fraxinus wood is evident in S. nemoralis, whereas S. semipileata appears to be rather indifferent in this respect. All species can be found on thin branches, but some (S. nivea and S. semipileata) have also been recorded from coarse woody debris (>20 cm Ø). The examples presented above indicate that ecological specialisation amongst the angiosperm-dwelling species is relatively weak. However, generalisations from common and widespread species, such as S. semipileata, are likely to be biased. Some degree of niche partitioning could be expected at least locally, where two or more species co-occur.
The observed pattern of overlapping species distributions in the S. nivea complex indicates that effective hybridisation barriers are in place between species. The mechanisms of reproductive isolation and the evolutionary processes that have led to their formation are thus far unverified. The existence of possible innate reproductive barriers that prevent hybridisation on shared substrates could be investigated by mating experiments. However, in order to conduct such studies, fresh material will need to be collected to establish living cultures of the species in the S. nivea complex. Further ecological study is also required to elucidate possible higher resolution patterns of distribution and substrate use. Special care should be taken to record detailed collection data including the species, size class, quality, position and decay stage (following e.g.
After macroscopic and microscopic study of 60 specimens representing 13 species (more than 700 pores, 1700 spores and 3000 hyphae measured), the majority of the species in the S. nivea complex are left without reliable morphological diagnosis. Intraspecific variability in basidiocarp phenology appears to be too wide to infer interspecific differences. On the other hand, the microscopic structures of the hyphal system are remarkably uniform across species. Easily measurable quantitative characters such as the spore dimension provide only minimal differentiation, if any. Identification is particularly problematic amongst the angiosperm-dwelling species, many of which clearly have overlapping distributions; only S. (aff.) futilis is distinguished by distinctly larger spores.
A collective description of the S. nivea complex is provided below. Individual species descriptions focus on relevant specifications for each species.
Basidiocarps (Fig.
Hyphal structure: context and subiculum seemingly trimitic (Fig.
Microscopic structures of Skeletocutis ochroalba (reproduced after
Trama (Fig.
Microscopic structures of the Skeletocutis nivea complex. A S. lepida, tramal skeletal hypha amongst generative hyphae (holotype) B S. semipileata, ends of generative and skeletal hyphae in trama (Miettinen 17135) C S. nemoralis, tube trama and hymenium (holotype) D S. nivea, tube trama and hymenium with encrusted generocystidia (epitype) E S. nivea, basidia (Miettinen 16350) F S. semipileata, basidia (epitype) G S. cummata, the largest basidia in the the S. nivea complex (Niemelä 9088).
Hymenium with fusiform cystidiols (Fig.
Basidiospores (Fig.
The tramal hyphal structure in S. nivea and S. ochroalba has traditionally been described as monomitic. However, our microscopic study revealed two distinct hyphal types existing in the trama of all species in the S. nivea complex. Amongst the normal clamped and thin-walled generative hyphae, there are usually at least some notably wider and slightly thick-walled hyphae which seem to lack clamps. We call these special hyphae tramal skeletal hyphae. They appear to originate from the generative hyphae in the trama and reach down almost to the pore mouths. Usually the lack of clamps, greater width and thicker walls help to tell them apart from generative hyphae in the trama. Although the tramal skeletal hyphae are usually wide and only slightly thick-walled, some specimens of S. nivea had narrower and solid skeletal hyphae in the trama.
Sometimes the tramal hyphal structure is dominated by the skeletal hyphae but sometimes they seem to be missing completely or occur only sporadically in otherwise monomitic tramal structure (at least in S. nemoralis and S. semipileata). They can also be difficult to detect when the whole tramal structure becomes sclerified and generative hyphae also develop thickened walls, which was observed in some specimens of S. nivea. In general, clear detection of tramal skeletal hyphae is easiest in a squash mount from very thin longitudinal slices of the tube layer which have been properly thinned to an almost disintegrated state.
The nature of the arbuscule-like ‘binding hyphae’ has been discussed by
U.S.A. Florida: Alachua County, Gainesville, indet. angiosperm wood, 20 Nov 2013 Miettinen 17761 (H 7008665, isotype FLAS).
Basidiocarps annual; half-resupinate; up to 1.5 cm wide and 2 mm thick; hard when dry but easy to break apart; pilei thin, protruding up to 5 mm; margin incurved; upper surface minutely rough, matted, white to cream coloured when young, turning ochraceous; context up to 1.5 mm thick, faintly zonate in longitudinal section with thin dark lines separating layers of growth; tube layer up to 0.5 mm thick; pores 8–10(–11) per mm.
Hyphal structure: skeletal hyphae in context / subiculum (1.0–)2.0–2.9(–3.5) µm wide, in trama (1.0–)2.0–4.1(–5.2) µm wide, generative hyphae in trama 1.0–2.0(–2.9) µm wide.
Basidiospores 2.5–3.1(–3.3)×0.5–0.6(–0.7) µm, L=2.86 µm, W=0.55 µm, Q’=(4.0–)4.3–6.0(–6.9), Q=5.18, n=60/2.
The species is known only from two specimens from southern U.S.A., collected from warm temperate deciduous forests where specimens were growing on rather thin twigs of unidentified woody angiosperm.
Calidus (Lat.), warm, refers to the southern distribution.
U.S.A. Arkansas: Marion County, Yellville, indet. angiosperm wood, 25 Oct 2013 Miettinen 17466 (H, FLAS); Florida: (holotype, see above).
Poria coprosmae G. Cunn., Bulletin of the New Zealand Department of Industrial Research 72: 38 (1947).
New Zealand. Westland: Lake Mapourika, Coprosma, Nov 1946 J.M.Dingley (PDD 5252, studied).
Basidiocarps possibly perennial; resupinate to half-resupinate; up to 6 cm wide and 8 mm thick; hard when dry, breaking apart neatly; pilei fleshy, protruding up to 1.7 cm; margin blunt with narrow, sterile ridge on the underside; upper surface minutely rough, matted, white to cream coloured when young, turning ochraceous brown and finally blackish with age; pore surface sometimes with greenish-grey tints deep within the tubes in pileate part; context and subiculum whitish-cream colour to light greyish-brown near contact with substrate (in thick basidiocarps); context up to 5 mm thick, azonate; tube layer from 0.5–1.5 up to 6 mm thick and zonate in perennial basidiocarp, lighter horizontal zones appear where tubes are filled with arbuscule-like ‘binding hyphae’; pores (6–)7–8(–9) per mm.
Hyphal structure: skeletal hyphae in context 2.0–4.3(-5.3) µm wide, in subiculum (1.0–)2.0–3.5(–4.2) µm wide, in trama 2.0–4.0(–5.0) µm wide, generative hyphae in trama 1.0–2.3(–3.0) µm wide.
Basidiospores 2.8–3.2(–3.3)×0.5–0.7 µm, L=2.98 µm, W=0.57 µm, Q’=(4.0–)4.3–6.0(–6.4), Q=5.19, n=60/2.
Available material is very limited but suggests a rather wide, temperate Australasian distribution from Tasmania to southern New Zealand.
AUSTRALIA. Tasmania: Huon Valley, indet. angiosperm wood, 21 Nov 2006 Gates 1898 (H). NEW ZEALAND. Westland: (holotype, see above).
After examining the type, we have chosen to use a previously published name Poria coprosmae as the basionym for this Australasian species. P. coprosmae was described by
In their type studies of Polyporaceae species described by Cunningham,
S. nivea occurs in the North Island of New Zealand and it is possible that these two species could overlap as S. nivea has been shown to extend respectively far into the temperate zone in the northern hemisphere. The type specimen is a thin and resupinate basidiocarp on a fallen branch of a Coprosma shrub. The Tasmanian specimen, on the other hand, has evidently been growing on coarse wood and is unique in having a clearly perennial habit with a zonate tube layer.
China. Jilin: Antu, Changbai Mountains, alt. 1300 m, Picea jezoënsis, 18 Sep 1998 Niemelä 6408 & Dai (H 7008666).
Basidiocarps annual; half-resupinate to pileate; up to 3 cm wide and (pilei) up to 1 cm thick; hard when dry but easy to break apart; pilei nodulous or thick but steeply sloping, protruding up to 1 cm; margin of pileus curved downwards, blunt, with narrow, woolly ridge on the underside; upper surface matted to minutely pubescent, white to cream coloured when young, turning ochraceous with almost orange hues; pore surface with ochraceous or sometimes salmon/peach coloured tints, sometimes a greenish-grey tint is visible in the tubes; context and subiculum finally coriaceous but looser and fibrous near cap edge and surface; context faintly zonate in longitudinal section with thin dark lines separating layers of growth; tube layer up to 1 mm thick; pores (5–)7–8(–13) per mm.
Hyphal structure: the outer layer of context typically with a loose, fibrous texture composed of radially orientated encrusted hyphae (tomentum). Skeletal hyphae in context / subiculum (1.0–)2.0–3.5(–5.0) µm wide, in trama 2.0–4.0(–5.0) µm wide, generative hyphae in trama 1.0–2.0(–2.6) µm wide.
Basidiospores (2.8–)2.9–3.4(–3.9)×0.5–0.8(–0.9) µm, L=3.1 µm, W=0.66 µm, Q’=(3.3–)3.8–6.0(–6.6), Q=4.68, n=270/9.
Boreal, Eurasian taiga; known from Fennoscandia, Czech Republic and Far East. The species seems to be rather rare in Europe but possibly more common in the Far East where Spirin (H) has collected it abundantly. The species has been found growing on fallen spruce logs (Picea abies, P. jezoënsis) but also on Abies nephrolepis and Larix sp.
Cummatus (Lat.), resinous, refers to the brown upper surface of basidiomes.
CHINA. Jilin: (holotype, see above). FINLAND. Etelä-Häme: Hämeenlinna, P. abies (fallen, fairly thin, still corticated tree), 17 Sep 2013 Niemelä 9088 & Spirin (H). RUSSIA. Khabarovsk Reg.: Khabarovsk Dist., Levyi Ulun, P. jezoënsis, 21 Aug 2012 Spirin 5472 (H); 5484 (H); Malyi Kukachan, Larix sp., 19 Aug 2012 Spirin 5430 (H); Malyi Niran, P. jezoënsis, 6 Aug 2012 Spirin 4897 (H); Ulun, P. jezoënsis, 26 Aug 2012 Spirin 5676 (H); Solnechny Dist., Igdomi, Abies nephrolepis, VIII.2011 Spirin 3857; Suluk-Makit, P. jezoënsis, 17 Aug 2011 Spirin 4170 (H).
S. cummata is most notably distinguished from other Eurasian species in the S. nivea complex by its occurrence on conifer wood. Spores of S. cummata are also larger than those of angiosperm-dwelling species apart from S. futilis. The pubescence on pileus surface in pileate specimens provides an additional identification cue. Very wide but thin-walled tramal skeletal hyphae seem to be particularly pronounced in this species. All distinctive features of S. cummata are shared with the North American conifer-dwelling species S. ochroalba.
Finland. Uusimaa: Helsinki, Sorbus aucuparia, 24 Sep 2012 Miettinen 15745 (H 7008667).
Basidiocarps annual; half-resupinate; small, up to 5 mm wide and 1.5 mm thick; hard when dry but easy to break apart; pilei very small and nodulous; upper surface white when young, turning yellowish-brown; context and subiculum white; tube layer up to 0.2 mm thick; pores 6–8 per mm.
Hyphal structure: skeletal hyphae in context / subiculum (1.0–)2.0–3.0(–3.3) µm wide, in trama scarce, (1.0–)2.0–3.9(–4.9) µm wide, generative hyphae in trama 1.0–2.0(–3.2) µm wide.
Basidiospores 3.0–4.0×0.7–0.9 µm, L=3.33 µm, W=0.81 µm, Q’=(3.3–)3.4–5.1, Q=4.13, n=30.
The species is known only from the type specimen which was collected from a Betula stand on a disturbed site near the seashore in Helsinki, Finland (hemiboreal zone) where it was growing on rather thin twigs of Sorbus aucuparia.
Futilis (Lat.), fragile, insignificant.
FINLAND: Uusimaa: (holotype, see above).
While macroscopic features may be quite scanty, characteristic trimitic-looking subiculum, skeletal hyphae in trama and encrustations of dissepiment edge hyphae reveal S. futilis to be a member of the S. nivea complex. S. futilis can be distinguished from other species in the complex by thicker spores.
In our analyses, S. futilis constitutes a sister taxon to the rest of the S. nivea complex. The clade also includes S. aff. futilis in North America. Owing to the limited material available, we refrain from judging whether they represent geographic variation within one species or vicariant sister species. The voucher specimens of S. aff. futilis (Lindner DLL2009-067; -068 (CFMR)) are in a rather poor condition, but it seems that the small size of basidiocarps and thick spores are as characteristic for S. aff. futilis as they are for S. futilis.
Uganda. Western Reg.: Kabale Dist., Bwindi Impenetrable National Park, indet. angiosperm wood, 18 Nov 2002 Ipulet F1104 (O 918073, isotype H 7017125).
Basidiocarps annual; half-resupinate; up to 6 mm thick; hard when dry, breaking apart neatly; pilei fleshy, protruding up to 5 mm; margin blunt; upper surface almost smooth, matted, white to cream coloured when young, turning ochraceous brown and finally blackish with age; context and subiculum whitish-cream to light greyish-brown; context up to 5 mm thick, zonate in longitudinal section with thin dark lines separating layers of growth; tube layer from up to 1 mm thick; pores (7–)8–9(–10) per mm.
Hyphal structure: skeletal hyphae in context 2.0–3.2(–4.1) µm wide, in subiculum (1.0–)2.0–3.0(–3.8) µm wide, in trama (1.0–)2.0–3.5(–4.9) µm wide, generative hyphae in trama 1.0–2.0 µm wide.
Basidiospores (2.8–)2.9–3.1×0.5–0.8 µm, L=2.97 µm, W=0.61 µm, Q’=(3.6–)3.8–6.0(–6.2), Q=4.85, n=30.
The species is known only from the type specimen, collected from Bwindi Impenetrable National Park in Uganda where it was reportedly growing on rotting branches.
Impervius (Lat.), impenetrable; the species is morphologically indistinguishable from its kins.
UGANDA. Western Reg.: (holotype, see above).
Uganda. Western Reg.: Kabarole Dist., Kibale National Park, indet. angiosperm wood (leaning dead branch), 28 Oct 2002 Ipulet F761 (H 7017127, isotype O 918074).
Basidiocarps annual; half-resupinate; up to 2.5 cm wide and 6 mm thick; hard when dry, breaking apart neatly; pilei fleshy, protruding up to 5 mm; margin blunt; upper surface almost smooth, matted, white to cream coloured when young, turning ochraceous brown; pore surface cream coloured with greyish tint deep within the tubes; context and subiculum whitish-cream to light greyish-brown; context up to 5 mm thick, faintly zonate in longitudinal section with thin dark lines separating layers of growth; tube layer up to 1.5 mm thick; pores 9–10(–11) per mm.
Hyphal structure: skeletal hyphae in context / subiculum 2.0–3.0(–3.6) µm wide, in trama (1.0–)2.0–4.1(–5.0) µm wide, generative hyphae in trama 1.0–2.0(–2.2) µm wide.
Basidiospores 2.8–3.4×0.5–0.7(–0.8) µm, L=2.96 µm, W=0.6 µm, Q’=(4.0–)4.1–6.0(–6.2), Q=4.97, n=30.
The species is known only from the type specimen, collected from Kibale National Park in Uganda, where it was reportedly growing on a leaning, dead branch.
Named in honour of the pioneering Ugandan mycologist Perpetua Ipulet, who collected the type of this species.
UGANDA. Western Reg.: (holotype, see above).
Japan. Kansai Reg.: Shiga Prefecture, Otsu, indet. angiosperm wood, 7 Nov 2013 Schigel 7684 & Nakamori, Tanaka, Nakano (H 7008661, isotype TFM).
Basidiocarps annual; half-resupinate; pilei up to 3 cm wide, nodulous or up to 4 mm thick and fleshy, blunt edged; upper surface slightly rough, matted, white to cream coloured when young, turning ochraceous; context faintly zonate in longitudinal section with thin dark lines separating layers of growth; tube layer up to 1 mm thick; pores (7–)8–9(–10) per mm.
Hyphal structure: skeletal hyphae in context / subiculum (1.0–)2.0–3.3(–4.0) µm wide, in trama (1.0–)2.0–3.5(–4.9) µm wide, generative hyphae in trama 1.0–2.2(–3.0) µm wide.
Basidiospores See general description of microscopic structures; (2.8–)2.9–3.0(–3.1)×0.5–0.6 µm, L=2.95 µm, W=0.55 µm, Q’=4.8–6.0, Q=5.36, n=90/3.
Available material is limited but suggests a temperate East Asian distribution. Russian specimens represent rather small basidiocarps that were collected from thin, fallen angiosperm branches. The holotype from Japan is a sturdier basidiocarp that was probably growing on a thick branch or a log.
Lepidus (Lat.), charming, nice, elegant.
JAPAN. Kansai Reg.: (holotype, see above). RUSSIA. Khabarovsk Reg.: Khabarovsk Dist., Malyi Niran, Tilia amurensis, 7 Aug 2012 Spirin 4989 (H); Solnechny Dist., Boktor, Quercus mongolica, 8 Aug 2011 Spirin 3964 (H).
Finland. Åland: Lemland, Nåtö, Fraxinus excelsior (fallen branch), 9 Oct 2012 Korhonen 90 (H 7008662).
Basidiocarps annual; resupinate to half-resupinate; bone hard when dry, breaking apart neatly; resupinate basidiocarps up to 10+ cm wide; pilei nodulous to shelf-shaped, often laterally fused and fleshy, protruding up to 1.3 cm; sterile margin often quite pronounced especially in resupinate part; upper surface slightly rough, matted, white to cream coloured when young, turning ochraceous and finally blackish with age; pore surface sometimes with a greenish-grey or turquoise tint emerging within the tubes especially in the pileate part but sometimes in scattered blotches; context sometimes faintly zonate in longitudinal section; tube layer up to 2 mm thick; pores (6–)7–8(–10) per mm.
Hyphal structure: skeletal hyphae in context / subiculum (1.0–)2.0–3.0(–4.0) µm wide, in trama (1.0–)2.0–3.9(–5.0) µm wide, generative hyphae in trama 1.0–2.2(–2.9) µm wide.
Basidiospores (2.8–)2.9–3.2(–4.0)×(0.4–)0.5–0.6(–0.7) µm, L=3.04 µm, W=0.56 µm, Q’=(4.1–)4.8–6.3(–7.8), Q=5.47, n=390/13.
Temperate Eurasia, found in Europe, Iran and Japan; on angiosperm wood, especially Fraxinus, preferring coarse substrates like thick branches or even logs.
Refers to the distribution area of the species in the nemoral zone.
FINLAND. Åland: Jomala, Ramsholm, Fraxinus excelsior (fallen branch), 10 Oct 2012 Korhonen 100 (H); 103 (H); Lemland, Nåtö, F. excelsior (fallen branch) 9 Oct 2012 Korhonen 86 (H); 89 (H); (holotype, see above); Corylus avellana (fallen branch) Korhonen 93 (H). NORWAY. Møre og Romsdal: Sunndal, Populus tremula, 24 Sep 2008 Gaarder 5257 (O 288578); Nord-Trøndelag: Verdal, Sorbus aucuparia, 30 Aug 2006 Klepsland JK06-S080 (O 284195); Sogn og Fjordane: Aurland, Tilia cordata, 10 Jul 2004 Brandrud 149-04 (O 166204). POLAND. Podlaskie Voivodeship: Białowieża National Park, Carpinus betulus (fallen branch), 15 Sep 2012 Korhonen 35 (H); F. excelsior (fallen branch), 15 Sep 2012 Korhonen 28 (H); 31 (H); 18 Sep 2012 Korhonen 83 (H).
S. nemoralis shares its wide distribution in Eurasia with similar-looking S. semipileata. Both species tend to form rather large, half-resupinate basidiocarps with fleshy pilei. S. nemoralis has slightly larger spores and pores than S. semipileata, but the distinction is probably too small for definitive identification.
In Europe, S. nemoralis does not reach as far to the northeast as S. semipileata and appears to be missing in continental Finland. At its north-eastern outpost in Åland Islands, S. nemoralis is rather common, especially in old coppice meadows where it prefers the wood of Fraxinus.
Polyporus niveus Jungh. Praemissa in floram cryptogamicam Javae insulae: 48 (1838).
Indonesia. Central Java: Mount Merapi, Junghuhn 44 (L).
Indonesia. Central Java: Mount Lawu, alt. 2130 m, old-growth montane forest dominated by Castanopsis javanica, indet. angiosperm wood (fallen branch), 22 May 2014 Miettinen 18217 (BO, designated here, duplicate H 7008663). MycoBank No. MBT378098
Basidiocarps annual; half-resupinate; hard when dry, breaking apart neatly; pilei nodulous to shelf-shaped, sometimes laterally fused and quite fleshy, up to 2 cm wide and 5 mm thick, protruding up to 1.3 cm, often connected to wider resupinate part; upper surface almost smooth to slightly rough, matted, white to cream coloured when young, turning ochraceous and finally blackish with age; pore surface often with a greenish-grey or turquoise tint emerging within the tubes particularly in the pileate part but often in scattered blotches; context and subiculum coriaceous, white; context sometimes faintly zonate in longitudinal section; tube layer up to 1 mm thick; pores (7–)8–10(–13) per mm.
Hyphal structure: trama dimitic but sometimes seemingly monomitic with slightly sclerified generative hyphae or sometimes clearly dimitic with solid skeletal hyphae; skeletal hyphae in context / subiculum (1.0–)2.0–3.0(–3.9) µm wide, in trama (1.0–)2.0–3.5(–4.9) µm wide, but only 2–3 µm wide and solid in specimens from New Zealand, generative hyphae in trama 1.0–2.3(–2.8) µm wide.
Basidiospores (2.7–)2.8–3.2(–3.7)×0.5–0.7(–0.8) µm, L=2.96 µm, W=0.56 µm, Q’=(3.9–)4.3–6.0(–6.2), Q=5.27, n=125/5.
From tropical southeast Asia to subtropical New Zealand in the south and temperate China in the north, on angiosperm wood.
CHINA. Jilin: Antu, Changbai Mountains, alt. 1100 m, Alnus sp. (fallen tree crown), 27 Aug 2015 Miettinen 10579.1 (H). INDONESIA. Central Java: (epitype, see above); alt. 2180 m, old-growth montane forest dominated by Castanopsis javanica, indet. angiosperm wood (fallen tree), 22 May 2014 Miettinen 18255 (ANDA, H); (holotype, see above). MALAYSIA. Sabah: Kinabalu Park, alt. 1675 m, lower montane forest, indet. angiosperm wood, 17 Jun 2013 Miettinen 16350 (SNP, H). NEW ZEALAND. Auckland: Hunua Ranges, indet. angiosperm wood, 19 Mar 1996 Ryvarden 38171 (O 916495); 38177 (O 916496).
The holotype of S. nivea is sterile but it possesses the encrusted generocystidia and arbuscule-like ‘binding hyphae’ characteristic to the S. nivea complex. Specimens from New Zealand represent a disjunct population and exhibit aberrant hyphal morphology with clearly dimitic trama. However, they do not stand out phylogenetically (in ITS) from the rest of S. nivea.
Canada. Northern Quebec: Poste-de-la-Baleine, Picea sp., 7 Aug 1982 Niemelä 2695 (H 7017091)
Basidiocarps annual or possibly perennial; half-resupinate to pileate; up to 3 cm wide and (pilei) up to 8 mm thick; hard when dry but easy to break apart; pilei nodulous or thick but steeply sloping, protruding up to 1 cm; margin of pileus curved downwards, blunt, with narrow, woolly, ridge on the underside; upper surface matted to minutely pubescent, white or cream coloured when young, turning ochraceous brown; pore surface cream coloured with ochraceous or sometimes salmon/peach coloured tints, sometimes a greenish-grey tint is visible in the tubes; context and subiculum finally coriaceous but looser and fibrous near cap edge and surface; context faintly zonate in longitudinal section with thin dark lines separating layers of growth; tube layer up to 1 mm thick, sometimes divided by a thin white layer where tubes are filled with arbuscule-like ‘binding hyphae’, otherwise pale buff; pores (6–)7–8(–10) per mm.
Hyphal structure: the outer layer of context typically has a loose, fibrous texture composed of radially orientated hyphae. Skeletal hyphae in context / subiculum (1.0–)2.0–3.5(–4.0) µm wide, in trama 2.0–4.6(–6.2) µm wide, generative hyphae in trama 1.0–2.2(–2.9) µm wide.
Basidiospores (2.8–)2.9–3.7(–4.0)×0.5–0.8 µm, L=3.1 µm, W=0.67 µm, Q’=3.8–6.0(–7.0), Q=4.65, n=70/3.
Boreal North America, possibly quite rare, findings from Northern Quebec and Alberta in Canada; growing on fallen Picea logs.
CANADA. Alberta: William A. Switzer Provincial Park, Picea sp., 24 Jul 2015 Spirin 8854a (H); 8854b (H); Northern Quebec: Poste-de-la-Baleine, Picea sp., 7 Aug 1982 Niemelä 2689.
S. ochroalba is most notably distinguished from other North American species of the S. nivea complex by its occurrence on conifer wood. Surface of the pileus is characteristically pubescent in this species. The spores of S. ochroalba are also thicker than those of North American angiosperm-dwelling species apart from S. aff. futilis. Resemblance to the Eurasian conifer-dwelling S. cummata is strong both in phenology and microscopic structure.
Polyporus semipileatus Peck, Annual Report on the New York State Museum of Natural History 34: 43 (1881).
U.S.A. New York: Catskill Mountains, Acer spicatum, Aug 1880 Peck (BPI 220657 ISOTYPE, designated here). MycoBank No. MBT381253
U.S.A. New York: Essex County, Huntington Wildlife Forest, Betula sp. (branch), 15 Aug 2012 Miettinen 15536 (H 7008664, designated here, duplicate in BPI). MycoBank No. MBT381348
Basidiocarps annual; resupinate to half-resupinate; hard when dry, breaking apart neatly; resupinate basidiocarps up to 10+ cm wide; pilei nodulous to shelf-shaped, often laterally fused, up to 4 mm thick and protruding up to 1.5 cm, sometimes rather fleshy but often thin and sharp-edged with slightly incurved margin or with narrow, sterile ridge on the underside; upper surface slightly rough, matted, white to cream coloured when young, turning ochraceous and finally blackish with age; pore surface cream coloured with ochraceous or rarely faint salmon coloured tints, often a greenish-grey or turquoise tint emerges within the tubes particularly in the pileate part, sometimes in scattered blotches; context and subiculum coriaceous, white; context sometimes faintly zonate in longitudinal section; tube layer up to 2 mm thick; pores (7–)8–9(–11) per mm.
Hyphal structure: skeletal hyphae in context / subiculum (1.0–)2.0–3.3(–4.3) µm wide, in trama (1.0–)2.0–3.9(–5.0) µm wide, generative hyphae in trama 1.0–2.1(–3.0) µm wide.
Basidiospores (2.3–)2.8–3.1(–3.3)×0.4–0.6(–0.7) µm, L=2.97 µm, W=0.55 µm, Q’=(4.1–)4.7–7.0(–7.5), Q=5.43, n=450/15.
Temperate holarctic, extending to south-boreal zone at least in Fennoscandia; on various angiosperm species, often on thin fallen branches but sometimes on coarse wood as well.
FINLAND. Uusimaa: Helsinki, indet. angiosperm (fallen branch), 9 Oct 2011 Miettinen 14917.4 (H); Kirkkonummi, Prunus padus (fallen tree), 24 Oct 2012 Miettinen 15835 (H). Etelä-Häme: Hämeenlinna, Lammi, Corylus avellana (fallen branch), 11 Sep 2002 Miettinen 6694 (H); Pohjois-Häme: Jyväskylä, Vuoritsalo, Juniperus communis (fallen trunk), 15 Jul 2017 Miettinen 21003 (H). NORWAY. Møre og Romsdal: Nesset, Ulmus glabra, 22 Sep 2006 Ryvarden 47279 (O 361851); Sogn og Fjordane: Luster, C. avellana, 25 Aug 2007 Gaarder 5136 & Dybwad (O 293503). POLAND. Podlaskie Voivodeship: Hajnówka, C. avellana, 18 Sep 2012 Korhonen 76 (H). RUSSIA. Khabarovsk Reg.: Khabarovsk Dist., Ilga, Actinidia kolomikta, 10 Aug 2012 Spirin 5142 (H); Nizhny Novgorod Reg.: Lukoyanov Dist., Sanki, C. avellana, 7 Aug 2005 Spirin 2326 (H). UNITED KINGDOM. Scotland: South Lanarkshire, P. padus (fallen tree), 6 Jul 2010 Miettinen 14114 (H). U.S.A. Massachusetts: Holden, Betula sp. (fallen branch), 6 Sep 2013 Miettinen 16823 (H); Minnesota: Waseca, Tilia americana (fallen branch), 18 Aug 2013 Miettinen 16693.1 (H); New York: (lectotype, see above); (epitype, see above); indet. angiosperm wood, 18 Aug 2012 Miettinen 15715 (H); Betula sp., 22 Sep 2013 Miettinen 17135 (H); Fagus grandifolia (fallen tree crown), 20 Sep 2013 Miettinen 17074 (H).
S. semipileata seems to be the most widespread species in the S. nivea complex and overlaps with many of the other angiosperm-dwelling species: in Europe with S. futilis and S. nemoralis; in the Far East with S. lepida and S. nivea; and in North America with S. aff. futilis and possibly with S. calida. Apart from S. (aff.) futilis, these species are almost impossible to distinguish from each other morphologically.
China. Yunnan: Xishuangbanna, Xishuangbanna Biosphere Reserve, alt. 700 m, indet. angiosperm wood, 5 Aug 2005 Miettinen 10002 (H 7008668, isotype BJFC).
Basidiocarps annual; half-resupinate; small, up to 1 cm wide and 1 mm thick; hard when dry but easy to break apart; pilei thin, protruding up to 4 mm; margin incurved; upper surface minutely rough, matted, white to cream coloured when young, turning ochraceous; context up to 0.7 mm thick, azonate; tube layer up to 0.3 mm thick; pores 7–9 per mm.
Hyphal structure: skeletal hyphae in context 1.0–2.9(–3.5) µm wide, in subiculum (1.0–)2.0–2.9(–3.2) µm wide, in trama 2.0–4.0(–4.8) µm wide, generative hyphae in trama 1.0–1.9(–2.0) µm wide.
Basidiospores 2.9–3.2(–3.3)×(0.4–)0.5–0.6(–0.7) µm, L=3.04 µm, W=0.55 µm, Q’=(4.6–)4.8–6.4(–7.5), Q=5.49, n=30.
The species is known only from the type specimen, collected from Yunnan, China, where it was growing as small individual pilei on thin twigs of unidentified woody angiosperm.
Derived from unguis (Lat.), claw, nail; refers to nail-like basidiome caps.
CHINA. Yunnan: (holotype, see above).
China. Yunnan: Xishuangbanna, Menglun, alt. 640 m, indet. angiosperm wood, 4 Aug 2005 Miettinen 9950 (H 7008660, isotype BJFC, strain FBCC 1132).
Basidiocarps annual; resupinate to half-resupinate; small, up to 2.5 cm wide and 3 mm thick; hard when dry but easy to break apart; pilei nodulous, protruding up to 3 mm; margin blunt; upper surface minutely rough, matted, white to cream coloured when young, turning ochraceous; pore surface cream coloured with yellowish to ochraceous tints; context up to 2.7 mm thick faintly zonate in longitudinal section with fuzzy, ochraceous lines separating layers of growth; tube layer up to 0.3 mm thick; pores 8–10(–11) per mm.
Hyphal structure: skeletal hyphae in context / subiculum 1.0–2.9(–3.8) µm wide, in trama (2.0–)3.0–4.0(–5.1) µm wide, generative hyphae in trama 1.0–2.0(–2.2) µm wide.
Basidiospores (2.7–)2.8–3.1(–3.2)×(0.4–)0.5–0.7 µm, L=2.96 µm. W=0.59 µm, Q’=(4.0–)4.1–6.0(–7.2), Q=4.99, n=90/3.
The species is known from three specimens from Yunnan, China, collected from twigs of unidentified woody angiosperm.
In honour of the Chinese polypore researcher, Prof. Yu-Cheng Dai.
CHINA. Yunnan: (holotype, see above); Xishuangbanna Biosphere Reserve, alt. 700 m, indet. angiosperm wood (dead standing tree), 9 Aug 2005 Miettinen 10150.2 (H); Xishuang Banna Primeval Forest Park, indet. angiosperm wood (fallen branch), 16 Aug 2005 Miettinen 10366.1 (H).
U.S.A. Maine: Piscataquis Co., Medford, Camp Sunday, on dead Populus, 28 Aug 1905 Murrill (NY, studied).
U.S.A. Maine: (holotype, see above)
P. hymeniicola is a poorly known species from North America which has sometimes been associated with the S. nivea complex (P. semipileatus by
Australia. Tasmania: Hobart, Rodway (BPI 301712).
Australia. Tasmania: Hobart, Rodway (BPI 302037).
Many researchers have contributed valuable material for this study; the following deserve a special mention: Genevieve Gates (Tasmania), Peter Buchanan (Landcare Research), Leif Ryvarden (Oslo) and Viacheslav Spirin (Helsinki). Yu-Cheng Dai (Beijing Forestry University) and his students organised a joint collecting trip in China resulting in important records, Nicholas J. Brazee (University of Massachusetts) provided locality data for North American voucher specimens. This research was supported by the National Science Foundation grant DEB0933081 by David Hibbett (Clark University), the European Commission Marie Curie grant PIOF-GA-2011-302349, Societas Biologica Fennica Vanamo and Lammin biologisen aseman Ympäristötutkimuksen Säätiö.
Specimens and INSDC accession numbers of DNA sequences used in this study
Estimates of average genetic divergence over sequence pairs within species
Estimates of genetic divergence over ITS sequence pairs between species
Estimates of evolutionary divergence over tef1 sequence pairs between species
Distribution maps