Research Article |
Corresponding author: Einar Timdal ( einar.timdal@nhm.uio.no ) Academic editor: Thorsten Lumbsch
© 2016 Einar Timdal, Walter Obermayer, Mika Bendiksby.
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Citation:
Timdal E, Obermayer W, Bendiksby M (2016) Psora altotibetica (Psoraceae, Lecanorales), a new lichen species from the Tibetan part of the Himalayas. MycoKeys 13: 35-48. https://doi.org/10.3897/mycokeys.13.8824
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In the present study, we describe the new species, Psora altotibetica, from nine localities in China (Tibetan area) and Nepal. The study includes analyses of anatomy, secondary chemistry, and DNA sequence data of P. altotibetica and presumed close relatives. Psora altotibetica resembles P. indigirkae morphologically, but is phylogenetically closer to P. tenuifolia and P. vallesiaca. It differs from P. indigirkae in the colour of the apothecia, the size of the ascospores, and in the secondary chemistry. The species is terricolous and was collected in the alpine zone of the Great Himalayas between 4230 and 5000 m altitude. Psora tenuifolia and P. vallesiaca are here reported as new to China and the Himalayas.
Asia, Lecanorales , lichenized ascomycetes, taxonomy
The genus Psora consists of c. 30 species growing on soil and rock, mainly in arid areas, from the arctic to the subtropical regions of the world (
In the current Chinese checklist (
On a visit to the herbarium of Institut für Pflanzenwissenschaften, Karl-Franzens-Universität Graz (GZU) in 1992, one of us (ET) discovered an apparently undescribed species of Psora collected near the Khumbu Glacier south of Mt Everest (Nepal) by Josef Poelt in 1962. Two years later, ET was asked by Torstein Engelskjøn to identify some specimens collected by him in 1993 in the Rongbuk Valley north of Mt Everest (Tibet) during a joint Chinese-Norwegian scientific expedition. The material comprised the same apparently undescribed species of Psora. The material from both expeditions was rather poor and put aside pending richer collections. In 2013, during a visit to GZU, MB was made aware of the Psora collection that WO had made in the Himalayas in 1994 and 2000. This collection contained the putative new species, and a renewed study, including DNA analysis, has led us to describe it here as Psora altotibetica.
This study is based on 15 collections of Psora made by WO in the Himalayas in 1994 and 2000, the collection of Psora altotibetica by J. Poelt (GZU), the two by T. Engelskjøn (TROM), two by G. & S. Miehe made in the Himalayas in 1993 (GZU), four collections from the Karakoram Range (Pakistan) in GZU which are here identified as P. himalayana and P. vallesiaca (Schaer.) Timdal, and two collections of P. indigirkae Timdal & Zhurb. from Yakutia in O. Voucher data for these 26 specimens are given in the list of examined specimens and in Table
Psora specimens used in this study with voucher information, major lichen substances, and GenBank accession numbers. New sequences are indicated by accession numbers in bold.
Taxon, Specimen | Voucher Information | Major Lichen Substances | GenBank Accession Number | |
---|---|---|---|---|
ITS | mtSSU | |||
P. altotibetica 1 | China, Xizang, Obermayer 5282 (GZU), holotype | gyrophoric acid | KU863638 | KU863651 |
P. altotibetica 2 | China, Xizang, Miehe & Miehe 9573/23/02 (GZU) | gyrophoric acid | KU863639 | KU863652 |
P. altotibetica 3 | China, Xizang, Obermayer 5223 (GZU) | gyrophoric acid | KU863640 | KU863653 |
P. altotibetica 4 | China, Xizang, Obermayer 4365 (GZU) | gyrophoric acid | KU863642 | KU863655 |
P. altotibetica 5 | China, Xizang, Obermayer 3967 (GZU) | gyrophoric acid | KU863641 | KU863654 |
P. altotibetica 6 | China, Xizang, Obermayer 4485 (GZU) | gyrophoric acid | KU863643 | KU863656 |
P. altotibetica | China, Xizang, Engelskjøn T-030b (TROM L-42812) | gyrophoric acid | - | - |
P. altotibetica | China, Xizang, Engelskjøn T-036 (TROM L-42813) | gyrophoric acid | - | - |
P. altotibetica | China, Xizang, Miehe & Miehe 9573/23/03 (GZU) | - | - | - |
P. altotibetica | China, Xizang, Obermayer 4350 (GZU) | gyrophoric acid | - | - |
P. altotibetica | China, Xizang, Obermayer 4502 (GZU) | - | - | - |
P. altotibetica | China, Xizang, Obermayer 4981 (GZU) | gyrophoric acid | - | - |
P. altotibetica | Nepal, Poelt 1138 (GZU) | gyrophoric acid | - | - |
P. californica | USA, California, Timdal SON139/04 (O-L-60112) | bourgeanic acid, gyrophoric acid | EF524322 | EF524292 |
P. globifera 1 | Greenland, Timdal 10149 (O-L-139171) | no substances | EF524323 | EF524294 |
P. globifera 2 | Norway, Klepsland JK11-L619 (O-L-183774) | no substances | KU873928 | - |
P. globifera 3 | Norway, Bendiksby et al. 12914 (O-L-184327) | no substances | KU873930 | - |
P. globifera 4 | Norway, Klepsland JK11-L213 (O-L-177145) | no substances | KU873929 | - |
P. globifera 5 | Norway, Hjelmstad s.n. (O-L-184143) | no substances | KU873932 | - |
P. himalayana | Russia, Yakutia, Zhurbenko 98161 (M-0066792) | - | AY425635 | - |
P. himalayana | Pakistan, Miehe & Miehe 3529 (GZU) | no substances | - | - |
P. himalayana | Pakistan, Poelt K91-416 | no substances | - | - |
P. hyporubescens | USA, California, Bratt & Timdal 7052 (O-L-22483), holotype | anthraquinones, gyrophoric acid | EF524311 | EF524295 |
P. indigirkae 1 | Russia, Yakutia, Haugan & Timdal YAK19/03 (O-L-19148), holotype | bourgeanic acid, gyrophoric acid | EF524302 | - |
P. indigirkae 2 | Russia, Yakutia, Haugan & Timdal YAK17/24 (O-L-19086), paratype | bourgeanic acid, gyrophoric acid | KU863631 | KU863644 |
P. indigirkae 3 | Russia, Yakutia, Zhurbenko 92185 (O-L-118686), paratype | bourgeanic acid, gyrophoric acid | KU863632 | KU863645 |
P. nitida | Mexico, Baja California, Timdal SON33/06 (O-L-15546) | gyrophoric acid | EF524313 | EF524296 |
P. pacifica | USA, California, Rosentreter 14580 (O-L-126265) | gyrophoric acid, unknown accessory | EF524314 | EF524297 |
P. peninsularis | Mexico, Baja California, Timdal SON32/07 (O-L-15539), holotype | norstictic acid | EF524320 | EF524298 |
P. russellii | Mexico, Baja California, Timdal SON31/03 (O-L-15531) | norstictic acid | EF524321 | EF524300 |
P. tenuifolia 1 | Russia, Yakutia, Haugan & Timdal YAK17/26 (O-L-19088) | norstictic acid, zeorin | EF524309 | EF524303 |
P. tenuifolia 2 | China, Xizang, Obermayer 4487 (GZU) | norstictic acid, zeorin | KU863636 | KU863649 |
P. tenuifolia 3 | China, Xizang, Obermayer 5236 (GZU) | zeorin | KU863637 | KU863650 |
P. tenuifolia | China, Sichuan, Obermayer 9791 (GZU) | norstictic acid, zeorin | - | - |
P. tenuifolia | China, Xizang, Obermayer 4525 (GZU) | zeorin | - | - |
P. testacea | Greece, Rui & Timdal TH06/04 (O-L-59263) | atranorin | EF524315 | EF524301 |
P. tuckermanii | USA, Arizona, Rui & Timdal US240/05 (O-L-59926) | no substances | EF524317 | EF524304 |
P. vallesiaca 1 | Greece, Rui & Timdal 7993 (O-L-15186) | norstictic acid | EF524324 | EF524291 |
P. vallesiaca 2 | China, Xizang, Obermayer 3227 (GZU) | norstictic acid | KU863633 | KU863646 |
P. vallesiaca 3 | China, Xizang, Obermayer 5279 (GZU) | no substances | KU863635 | KU863648 |
P. vallesiaca 4 | Pakistan, Poelt K91-705 (GZU) | norstictic acid | KU863634 | KU863647 |
P. vallesiaca 5 | Norway, Bendiksby et al. 12979 (O-L-184392) | norstictic acid | KU873926 | - |
P. vallesiaca 6 | Norway, Klepsland JK11-L624 (O-L-183778) | norstictic acid | KU873927 | - |
P. vallesiaca 7 | Norway, Klepsland JK11-L601 (O-L-183760) | norstictic acid | KU873931 | - |
P. vallesiaca | China, Xizang, Obermayer 4482 (GZU) | norstictic acid | - | - |
P. vallesiaca | Pakistan, Poelt s.n. (GZU) | norstictic acid | - | - |
Microscope sections were cut on a freezing microtome and mounted in water, 10% KOH (K), lactophenol cotton blue, a modified Lugol’s solution in which water was replaced by 50% lactic acid, and chlor-zinc-iodine. Amyloid reactions were observed in the modified Lugol’s solution after pretreatment in K. Chlor-zinc-iodine was used to locate remnants of algae in the cortex, and polarized light was used to locate crystals of secondary metabolites and calcium oxalate. Calcium oxalate was identified by adding 25% sulphuric acid to the section; the oxalate crystals dissolve and needle shaped crystals of calcium sulphate precipitate. Ascospore measurements are given as X ± 1.5×SD, where X is the arithmetic mean and SD – the standard deviation.
Thin-layer chromatography (TLC) was performed in accordance with the methods of
We performed DNA extraction, PCR amplification, PCR purification, and cycle sequencing as described by
Sequences were assembled and edited using SEQUENCHER v.4.1.4 (Gene Codes Corporation, Ann Arbor, Michigan, U.S.A.). Alignments were established in BIOEDIT 7.2.3 (
The 24 Central Asian specimens were identified by morphology and secondary chemistry as Psora altotibetica (13), P. himalayana (2), P. vallesiaca (5), and P. tenuifolia Timdal (4).
The following key characters for including P. altotibetica in Psora were observed in the new species: the upper cortex contained remnants of algae throughout both the lower stainable layer and the upper epinecral layer (‘Scheinrindentyp’ of
The following species level characters were observed in P. altotibetica: Upper cortex composed of thin-walled hyphae with rounded lumina; lower cortex composed of mainly periclinally oriented hyphae; crystals of calcium oxalate and assumedly gyrophoric acid (dissolving in K) present both in upper cortex and medulla; no crystals in lower cortex; ascospores 9–14 × 5–7 µm.
The results of the TLC examinations are given in Table
Altogether 26 DNA sequences were generated from 13 specimens for the present study (13 ITS and 13 mtSSU), including two specimens of P. indigirkae from Yakutia in O. In addition, seven unpublished ITS sequences of P. globifera (Ach.) A.Massal. and P. vallesiaca from Norway were generated by the lichen DNA barcode project, OLICH, at the Norwegian Barcode of Life (NorBOL). Moreover, 24 ITS and mtSSU sequences from 13 Psora specimens were downloaded from GenBank. GenBank accession numbers of all 57 sequences are given in Table
The ITS matrix of 32 accessions was 676 basepairs long and contained 181 parsimony-informative characters. The basepairs and parsimony-informative characters for the mtSSU matrix of 25 accessions were 881 and 28, respectively. The estimated best fit model of evolution for ITS was SYM+G and for mtSSU it was HKY+I+G. Both parsimony jackknife and Bayesian trees of ITS vs mtSSU were congruent but resolved to various extents (not shown). Therefore, for the final analyses, a concatenated dataset of 1557 bp was used. In the Bayesian analysis of the concatenated dataset, the average standard deviation of split frequencies had fallen to 0.0045 at termination (four million generations) and the first 1000 saved trees (i.e. 25%) were discarded as burn-in. The Bayesian 50% majority rule consensus tree, rooted with P. testacea, is presented with both Bayesian and parsimony branch support superimposed (Fig.
The Bayesian 50% majority rule consensus tree based on a concatenated alignment of ITS and mtSSU sequences of 33 accessions of 14 Psora species (see Table
Psora tenuifolia is the sister species of P. altotibetica in our phylogeny (Fig.
Psora vallesiaca is the phylogenetic sister species of the P. altotibetica - P. tenuifolia clade (Fig.
The other species of Psora known from the Himalayas, P. decipiens, differs in having orange to red or rose, more regularly rounded squamules with a usually more upturned and crenulate margin, in having strictly marginal apothecia, and in lacking lichen substances or more rarely containing norstictic acid or very rarely hyposalazinic and hypostictic acids (see, e.g.,
Nine other Psora species contain gyrophoric acid (
CHINA. Xizang: Himalaya Range, 165 km SSE of Lhasa, 40 km W of Lhünze, little village on way to Nera Tso (=Ni La Hu), 28°23'N, 92°05'E, 4300–4400 m alt., dry-valley, N-exposed dry slopes, on the ground, 1 Aug 1994, W.Obermayer 5282 (holotype: GZU!).
Thallus squamulose; squamules up to 3 mm wide, rounded, adnate, dispersed to adjacent, weakly concave to plane; upper surface medium brown, dull, becoming moderately to densely pruinose, smooth when young, later with fissures in the cortex; margin concolorous with upper side or partly white, straight to slightly down-turned or slightly up-turned, entire; upper cortex 40–60 μm thick, composed of pale brown, thin-walled hyphae with rounded lumina, containing remnants of algae throughout (Chlor-zinc-iodine!), containing crystals of gyrophoric acid (assumedly, dissolving in K) and (in pruinose squamules) crystals of calcium oxalate; epinecral layer hardly developed. Medulla not amyloid, containing both lichen substances (dissolving in K) and calcium oxalate; lower cortex poorly developed, composed of mainly periclinally oriented, pale brown hyphae, not containing crystals; lower surface brown. Apothecia up to 1.2 mm diam., marginal or submarginal on the squamules, plane and indistinctly marginate when young, soon becoming convex and immarginate, black, epruinose or faintly white pruinose at the margin. Hypothecium colourless, containing crystals of calcium oxalate; epihymenium yellowish brown, containing orange crystals dissolving in K, K+ purple. Ascus clavate, with a well-developed, amyloid tholus containing a deeper amyloid tube, lacking an ocular chamber (Porpidia-type); ascospores ellipsoid, simple, hyaline, 9–14 × 5–7 µm (n = 30). Conidiomata not seen.
Gyrophoric acid (by TLC); upper cortex and medulla K–, C+ faintly red, KC+ faintly red, P–.
The name refers to its occurrence at high altitude in the Tibetan part of the Himalayas.
Psora altotibetica. CHINA. Xizang: Shegar, Rongbuk Valley, S of Rongpu-si, 5000 m alt., moraine hill, 7 Jul 1993, T.Engelskjøn T-030b (TROM L-42812); 5000 m alt., rock base, patchwise on silt, 7 Jul 1993, T.Engelskjøn T-036 (TROM L-42813); Upper Tsangpo basin, N of Saga, 29°34'N, 85°15'E, alt. 4760 m, 28°W, grazed stony relicts of Juniperus dwarf-scrub, on ground, 26 Aug 1993, G.Miehe. & S.Miehe 9573/23/02 (GZU) & 9573/23/03 (GZU); 120 km SSW of Quamdo (=Changtu), 10 km S of Bamda, 30°09'N, 97°17'E, 4500–4700 m alt., on mosses, overhang, NNW-exp., 6 Aug 1994, W.Obermayer 3967 (GZU); Himalaya Range, 160 km S of Lhasa, dry valley of Kuru river, 10 km NW Lhozag, 28°24'N, 90°39'E, 4230 m alt., N-exposed steep rocks in a glen, on soil, 17 Jul 1994, W.Obermayer 4350 (GZU) & 4365 (GZU); Himalaya Range, 170 km S of Lhasa, between Lhozhag and Lhakhang Dzong, W-facing slopes of Dhalari mountain, 28°20'N, 90°58'E, 4300 m alt., NNW-exposed, ±underhang, 20 Jul 1994, W.Obermayer 4485 (GZU) & 4502 (GZU); Himalaya Range, 170 km SE of Lhasa, 110 km SSE of Tsetang (Nedong), 28°35'N, 92°23'E, 4700 m alt., alpine meadows with Kobresia pygmaea, ground with Ochotona-burrows, 26 Jul 1994, W.Obermayer 4981 (GZU); Himalaya Range, 130 km SE of Lhasa, 50 km SSE of Tsetang (Nedong), on way to the pass Putrang La, 28°52'N, 92°06'E, 4400 m alt., dry slope, on soil, 2 Aug 1994, W.Obermayer 5223 (GZU). NEPAL. Mahalangur Himal, Khumbu, Moränen des Khumbu-Gletschers bei Lobuche, 4950–5000 m alt., Sep 1962, J.Poelt 1138 (GZU).
Psora himalayana. PAKISTAN. Karakorum, Naz Bar (Yasin), 36°17–25'N, 73°0–17'E, 3400–3470 m alt., subalpine Juniperus communis dwarf-scrub with Juniperus macropoda trees in Seriphidium maritimum steppe; on silt in rock crevices, 11 Sep 1990, G.Miehe & S.Miehe 3529 (GZU); Karakorum, Baltistan, Haramosh Range, “Alm” Pakora SE Ganto La, 35°41'N, 75°21'E, 3600–3800 m alt., pasture and rocks around the alm, rocky slopes, 3 Jul 1991, J.Poelt K91-416 (GZU).
Psora indigirkae. RUSSIA. Sakha Republic: Momskii region, along the river Indigirka, c. 48 km NNW of Tyubelyakh, 65°48'N, 142°53'E, 200–300 m alt., on calcareous soil in limestone cliffs, 20 Jul 1992, R.Haugan & E.Timdal YAK17/24 (O L-19086); c. 54 km N-NNW of Tyubelyakh, 65°51'N, 143°01'E, 200–300 m alt., 20 Jul 1992, M.P.Zhurbenko 92185 (O L-118686).
Psora tenuifolia. CHINA. Sichuan: Tibetan fringe mountains (=Hengduan Shan), Shaluli Shan, on the outskirts of Yajiang, 200 m E of the river Yalong Jiang, 30°02’22”N, 101°00’16”E, 2610 m alt., NE-exposed dry slopes with schist outcrops, on thin soil crust (over schist), 12 Aug 2000, W.Obermayer 9791 (GZU); Xizang: Himalaya Range, 170 km S of Lhasa, between Lhozhag and Lhakhang Dzong, W-facing slopes of Dhalari mountain, 28°20'N, 90°58'E, 4300 m alt., NNW-exposed, ±underhang, 20 Jul 1994, W.Obermayer 4487 (GZU); Himalaya Range, 175-180 km S of Lhasa, between Lhozhag and Lhakhang Dzong, Kuru river valley, pass, 28°12'N, 91°00'E, 3600 m alt., on soil, 21 Jul 1994, W.Obermayer 4525 (GZU); Himalaya Range, 210 km SE of Lhasa, 15 km ESE of Lhünze, way to Qayü, dry-valley of Subansiri, 28°24'N, 92°37'E, 4100–4200 m alt., on soil (+ mosses), 31 Jul 1994, W.Obermayer 5236 (GZU).
Psora vallesiaca. CHINA. Sichuan: Shalui Shan Mts, 30 km NE Batang, S Yidun, 30°16'N, 99°25'E, 3750–3800 m alt., on marble outcrops, soil, 25 Jun 1994, W.Obermayer 3227 (GZU); Xizang: Himalaya Range, 165 km SSE of Lhasa, 40 km W of Lhünze, little village on way to Nera Tso (=Ni La Hu), 28°23'N, 92°95'E, 4300–4400 m alt., dry-valley, N-exposed dry slopes, on the ground, 1 Aug 1994, W.Obermayer 5279 (GZU); Himalaya Range, 170 km S of Lhasa, between Lhozhag and Lhakhang Dzong, W-facing slopes of Dhalari mountain, 28°20'N, 90°58'E, 4300 m alt., NNW-exposed, ±underhang, 20 Jul 1994, W.Obermayer 4482 (GZU); PAKISTAN. Karakorum, Baltistan, Haramosh Range, between “Alm” Matumdus (3620 m, 35°42'N, 75°23'E) and Hemasil in the Basna Valley, 3100–3200 m alt., 7 Jul 1991, J.Poelt K91-705 (GZU); Karakorum, Baltistan, Basna valley, Basnald, 2500 m alt., 10 Jul 1991, J.Poelt s.n. (GZU).
We are grateful to Torstein Engelskjøn, Tromsø, and the late Josef Poelt for the loan of material. The two expeditions of Walter Obermayer to the Tibetan area were financially supported by the Austrian Science Fund in 1994 (project number P09663-BIO) and in 2000 (project number P13676-BIO). The seven Norwegian ITS sequences were provided by the Norwegian Barcode of Life project, funded by the Norwegian Taxonomy Initiative (Norske Artsprosjektet) administered by the Norwegian Biodiversity Information Centre (ArtsDatabanken) (project number 70184216).