Research Article |
Corresponding author: Katarzyna Szczepańska ( katarzyna.szczepanska@upwr.edu.pl ) Academic editor: Garima Singh
© 2019 Katarzyna Szczepańska, Pamela Rodriguez-Flakus, Jacek Urbaniak, Lucyna Śliwa.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Szczepańska K, Rodriguez-Flakus P, Urbaniak J, Śliwa L (2019) Neotypification of Protoparmeliopsis garovaglii and molecular evidence of its occurrence in Poland and South America. MycoKeys 57: 31-46. https://doi.org/10.3897/mycokeys.57.34501
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Protoparmeliopsis garovaglii is a widely distributed placodioid lichen, which develops a distinctly rosette thallus, composed of elongated and strongly inflated to sinuous-plicate lobes. The taxon is characterised by high morphological plasticity and varied composition of secondary metabolites. However, the epithet was never typified. As such, the identity of P. garovaglii, in its strict sense, was unknown for a long time. Our phylogenetic ITS rDNA analyses, including newly generated sequences, show that European (Austria, Poland), North American (USA) and South American (Bolivia, Peru) specimens of P. garovaglii are placed in a strongly supported monophyletic clade, sister to P. muralis. We provide the first molecular evidence of the occurrence of P. garovaglii in South America (Bolivia and Peru) and the second record in Central Europe (Poland) was also provided. Furthermore, we neotypify P. garovaglii and it is reported here for the first time from Poland.
Geographical distribution, ITS rDNA, lichenised fungi, phylogeny, taxonomy, typification
The genus, Protoparmeliopsis Choisy, belongs to the large family of lichenised fungi Lecanoraceae. It includes species with a placodioid or umbilicate type of thallus, growing on siliceous rocks or on soil (
The Protoparmeliopsis genus was proposed by Choisy in 1929 with Protoparmeliopsis muralis indicated as a type species. However, the generic concept was not followed and, consequently, the majority of the lecanoroid species with characteristic placodioid thallus morphology were, for decades, included into the Lecanora subg. Placodium sect. Placodium group. This section was proposed by
During independent research, concentrated on the biodiversity of saxicolous lichens in Bolivia and Peru, as well as southern Poland, an interesting placodioid representative of Lecanoraceae has been found. Morphology and chemistry of the species suggested that it belongs to the Protoparmeliopsis genus. However, establishing its epithet turned out to be challenging. The scope of our study was to explain the systematic position of the lichen with application of integrated taxonomy tools. The survey revealed that the collection represents P. garovaglii and the status of the species is briefly discussed. As the epithet was never typified, a herbarium query was performed and, as a result, the species is neotypified herein.
This study is based on collections from the following herbaria: ASU, KRAM, L, MIN and WRSL, as well as the first author’s private material (hb. Szczepańska). The morphology and anatomy of the specimens were studied with a dissecting and light microscope according to routine techniques. For light microscopy, vertical, free-hand sections of apothecia were cut by a razor blade and mounted in water. Hymenium measurements were made in water and ascospores measurements in 10% potassium hydroxide – KOH (K). The structure and conglutination of paraphyses were also studied in K. The solubility of granules in epihymenium was tested with K and N (50% nitric acid). At least 10 measurements of the morphological variables were made for each sample and 20 spores from different specimens were assessed, as well as their minimum and maximum values being calculated.
Chemical examination included colour reactions and thin-layer chromatography (TLC). Spot test reactions of thalli, apothecial margins and discs were made with K, sodium hypochlorite [commercial laundry bleach] (C) and paraphenylenediamine [solution in 95% ethyl alcohol] (PD). The TLC analyses were undertaken in solvent system A, B’ and C using the standardised method of
Descriptions of the species are based on our own observations, measurements and TLC analyses made while examining the specimens cited in this paper. All specimens presented in the manuscript as in “Specimens examined” and included in the molecular analysis were studied; however, the morphological description of Protoparmeliopsis garovaglii is primarily based on the proposed neotype specimen. The terminology used in the descriptions of the species is based on
Genomic DNA was extracted from lichen thalli using the CTab method (
The obtained ITS rDNA sequences were assembled and manually edited using Geneious Pro, version 8.0. (Biomatters Ltd) and we also compared our fragments against the BLAST database in order to avoid potential contamination of other fungi (
The species and specimens studied; newly generated sequences for this study are in bold.
Species | Isolate | Locality | Collector (-s) | Voucher specimens (herbarium) | GenBank no. (ITS) |
---|---|---|---|---|---|
Myriolecis contractula | AFTOL-ID 877 | USA, Washington country | Brodo | Brodo 31501 (DUKE) | HQ650604 |
Myriolecis dispersa | USA, Illinois | Leavitt | Leavitt 12-002 (BRY-C) | KT453733 | |
Unitet Kingdom | Hill s.n. | KT453734 | |||
Protoparmeliopsis achariana | U155 | AF070019 | |||
Protoparmeliopsis garovaglii | Austria | AF189718 | |||
78 | USA, Idaho | Leavitt | Leavitt 078 (BRY-C) | KU934540 | |
88 | USA, Idaho | Leavitt | Leavitt 078 (BRY-C) | KU934541 | |
89 | USA, Idaho | Leavitt | Leavitt 079 (BRY-C) | KT453728 | |
95 | USA, Idaho | Leavitt | Leavitt 095 (BRY-C) | KU934542 | |
104 | USA, Idaho | Leavitt | Leavitt 104 (BRY-C) | KU934544 | |
105 | USA, Idaho | Leavitt | Leavitt 105 (BRY-C) | KU934545 | |
106 | USA, Idaho | Leavitt | Leavitt 106 (BRY-C) | KU934546 | |
107 | USA, Idaho | Leavitt | Leavitt 107 (BRY-C) | KU934547 | |
108 | USA, Idaho | Leavitt | Leavitt 108 (BRY-C) | KU934548 | |
109 | USA, Idaho | Leavitt | Leavitt 109 (BRY-C) | KU934549 | |
110 | USA, Idaho | Leavitt | Leavitt 110 (BRY-C) | KU934543 | |
116 | USA, Idaho | Leavitt | Leavitt 116 (BRY-C) | KU934550 | |
139 | USA, Utah | Leavitt | Leavitt 139 (BRY-C) | KU934551 | |
140 | USA, Utah | Leavitt | Leavitt 140 (BRY-C) | KU934535 | |
142 | USA, Utah | Leavitt | Leavitt 142 (BRY-C) | KT453729 | |
142 | USA, Utah | Leavitt | Leavitt 142 (BRY-C) | KU934536 | |
145 | USA, Utah | Leavitt | Leavitt 145 (BRY-C) | KT453727 | |
199 | USA, Utah | Leavitt | Leavitt 199 (BRY-C) | KU934537 | |
Protoparmeliopsis garovaglii | L21 | Poland | Szczepańska | Szczepańska 1240 (WRSL) | MK084624 |
L88 | Bolivia | Flakus | Flakus 17529 (KRAM) | MK084625 | |
L89 | Bolivia | Flakus | Flakus 21175 (KRAM) | MK084626 | |
L90 | Bolivia | Flakus | Flakus 21118 (KRAM) | MK084627 | |
L91 | Peru | Flakus | Flakus 9540 (KRAM) | MK084629 | |
L92 | Peru | Flakus | Flakus 9603 (KRAM) | MK084628 | |
Protoparmeliopsis macrocyclos | Sweden | U273 | AF159933 | ||
Protoparmeliopsis muralis | M122 | AF070015 | |||
DNA 9890 | Germany, Saxony | Scholz | Scholz 0275697 (M) | KT818623 | |
SK 765 | Romania | J.-S. Hur | J.-S. Hur (RO11-130) KOLRI | KP059048 | |
Russia | Vondrak | Vondrak 106a (PRA) | KU934559 | ||
Russia | Vondrak | Vondrak 106b (PRA) | KU934560 | ||
Russia | Vondrak | Vondrak 9405 (PRA) | KU934556 | ||
Russia | Vondrak | Vondrak 9417 (PRA) | KU934557 | ||
Russia | Vondrak | Vondrak 9417 (PRA) | KT453724 | ||
77 | USA, Utah | Leavitt | Leavitt 077 (BRY-C) | KU934552 | |
141 | USA, Utah | Leavitt | Leavitt 141 (BRY-C) | KT453725 | |
143 | USA, Utah | Leavitt | Leavitt 143 (BRY-C) | KU934554 | |
Protoparmeliopsis peltata | Iran | Sohrabi | MS014622 | KT453723 | |
Iran | Sohrabi | MS014620 (personal herbarium) | KU934739 | ||
Iran | Sohrabi | MS014621pelt (personal herbarium) | KU934721 | ||
Iran | Sohrabi | MS014623 (personal herbarium) | KU934722 | ||
Iran | Sohrabi | MS014624pelt (personal herbarium) | KU934723 | ||
Iran | Sohrabi | MS014630 (personal herbarium) | KU934731 | ||
Iran | Sohrabi | MS014637 (personal herbarium) | KU934732 | ||
Iran | Sohrabi | MS014638 (personal herbarium) | KU934733 | ||
Kazakhstan | Kaz 12921c | KU934745 | |||
Kazakhstan | Kaz 13085pelt | KU934746 | |||
Kazakhstan | Kaz 12943 | KU934747 | |||
Kazakhstan | Kaz 12948 | KU934748 | |||
Kazakhstan | Kaz 13082 | KU934749 | |||
Kyrgyzstan | ?Lommi, Sampsa | H920340 | KU934720 | ||
Kyrgyzstan | H9203329 | KU934719 | |||
Kyrgyzstan | H9203118 | KU934735 | |||
Kyrgyzstan | H9203304 | KU934736 | |||
Kyrgyzstan | H9203334 | KU934737 | |||
Kyrgyzstan | H9203194 | KU934738 | |||
Russia | Vondrak | Vondrak 9987 (PRA) | KU934725 | ||
Russia | Vondrak | Vondrak 9997 (PRA) | KU934726 | ||
Russia | Vondrak | Vondrak 10016 (PRA) | KU934727 | ||
Russia | Vondrak | Vondrak 10022 (PRA) | KU934728 | ||
Russia | Vondrak | Vondrak 10041 (PRA) | KU934729 | ||
Russia | Vondrak | Vondrak 10130 (PRA) | KU934730 | ||
Russia | Vondrak | Vondrak 9423 (PRA) | KU934740 | ||
Russia | Vondrak | Vondrak V127 (PRA) | KU934751 | ||
Russia | AsLap | 951 | KU934742 | ||
Russia | AitLap | 876 | KU934744 | ||
Russia | Sar | 937 | KU934743 | ||
Turkey | Vondrak | Vondrak 9783 (PRA) | KU934724 | ||
USA | Leavitt | Leavitt 601 (BRY-C) | KU934734 | ||
USA | Leavitt | Leavitt 663 (BRY-C) | KU934741 | ||
U198 | USA, Arizona | cf. ASU | AF159925 | ||
USA, Utah | KT453722 | ||||
Protoparmeliopsis zareii | 480 | Iran | B. Zarei-Darki | Zarei-Darki 1111 (SK) | KP059049 |
480 | Iran | B. Zarei-Darki | Zarei-Darki 1111 (SK) | KP059049 |
The phylogenetic construction was generated using the Maximum Likelihood (ML) bootstrap tree with simultaneous heuristic search, as implemented in RaxmlGUI version 0.9 beta 2 (
A total of 77 sequences were analysed in this study. The final alignment matrix contained eight OTUs and 545 unambiguously aligned nucleotides positions. The phylogeny shows highly supported clades [bootstrap support (BS) = 75%, posterior probability (PP) = 1] inferred from a single locus phylogeny, clearly delimiting the Lecanoraceae as separate from Myriolecis (outgroup) (Fig.
Bayesian Inference of the phylogenetic relationship within Protoparmeliopsis species, based on ITS rDNA sequences. High bootstrap support values are shown above thickened branches and bold numbers representing clades (ML – BP ≥ 70%, Bayesian analysis – PP ≥ 0.9). Highlighted squares represent P. garovaglii populations in Europe, South and North America. Parmeliaceae species were selected as the outgroup.
Placodium garovaglii Körb., Parerga Lichenol. (Breslau) 1:54 (1859) ≡ Squamaria garovaglii (Körb.) Anzi, Cat. Lich. Sondr. 46 (1860) ≡ Lecanora garovaglii (Körb.) Zahlbr., Ann. Naturhist. Hofmus. 15:208 (1900) ≡ Placolecanora garovaglii (Körb.) Räsänen, Hedwigia 81:230 (1944).
Hungary. Szent-György-hegy Mt, ‘Ad saxa basaltica montis “Szentgyörgyhegy” prope pagum Kisapáti, comit. Zala. Altit. ca. 400 m. s. m. Mens. Jun. 1920, G.Timkó’ [Flora Hungarici exsiccata 617, as Lecanora garovaglii] (neotype: WRSL-5777, designated here).
Thallus lichenised, placodioid, thick, usually distinctly circular, up to 12 cm diam., not very closely attached to the substrate, prothallus not present. Marginal lobes elongated, distinctly convex, swollen, sinuous, smooth 0.4–1.8 mm wide and 3–10 mm long, broadened and rounded at the ends (Figs
thallus K+ pale yellow, C–, KC+ yellow, P–; medulla K+ pale yellow, C–, KC+ yellow, P–. Secondary metabolites detected by TLC: ± isousnic, +usnic and ±placodiolic acids (cortex); +zeorin and ± unidentified terpenoides (medulla).
the species is widely distributed in the world. It occurs in Europe, Asia, Africa (Morocco;
Protoparmeliopsis garovaglii is widespread, occurring mostly in dry and warm Mediterranean to mountain areas, foothills and submontane sites (
Pišut, Lichenes Slovakiae exsiccati 36, as Lecanora garovaglii (KRAM); Suza, Lichenes Bohemoslovakiae exiccati 233, as Lecanora garovaglii (KRAM); Weber, Lichenes exsiccati 118, as Lecanora garovaglii (KRAM).
Poland. Przedgórze Sudeckie foreland: Wzgórza Strzegomskie hills, Góra Świętego Jerzego Mt, 50°58'25"N, 16°20'10"E, on basalt rocks, 354 m alt., 4 Oct. 2013, K.Szczepańska 1240 (WRSL). Bolivia. Dept. La Paz, Prov. Bautista Saavedra: Anmin Apolobamba, near Taypi Cañuma village, 15°03'20"S, 69°09'07"W, 4506 m alt., 5 July 2010, A.Flakus 17529 & P.Rodriguez-Flakus (KRAM, LPB); on the road from Apolo to Charazani villages (162 km), la Cruz Charazani-Pelechuco, 15°15'00"S, 69°02'51"W, 4545 m alt., 19 May 2011, A.Flakus 21118, 21175, 21176 & O.Plata (KRAM, LPB). Peru. Cañon del Colca, Dept. Arequipa, Prov. Caylloma: near Cabanaconde village, 15°37'56"S, 71°57'49"W, 3462 m alt., 4 July 2006, A.Flakus 9540 (KRAM); ibid. 15°38'18"S, 71°57'43"W, 3480 m alt., 5 July 2006, A.Flakus 9603 (KRAM).
Austria. Lower Austria: sunny slate rocks near Krems on the Danube River, 250 m alt., 3 Jan. 1897, Baumgarten (L). USA. Arizona. Coconino Co.: Grand Canyon National Forest, top of Hermit Trail, pinyon-juniper woodland, on limestone, 1950 m alt., 11 July 1994, T.H.Nash III 35474 (ASU); ibid., South Kaibab Trail, on sandstone, 1950 m alt., 29 June 1991, M.Boykin 2053 (ASU); Greenlee Co.: Apache National Forest, Juan Miller Canyon camp-ground, along the Blue River, ponderosa pine forest with riparian sp., on acid rock, 1740 m alt., 6 June 1998, T.H.Nash III 41809 (ASU); Maricopa Co.: Crater Range, along AZ 85, 42 km S of Gila Bend Sonoran Desert, on granite, 425 m alt., 27 Feb. 1998, T.H.Nash III 40608 (ASU); Santa Cruz Co.: Coronado National Forest, hillsides to S of Pena Blanca Lake (ca. 15 km WNW of Nogales) and just S of Ruby-Nogales Rd., oak woodland steep slope with rhyolite, on rhyolite, 1200 m alt., 2 June 1998, T.H.Nash III 41656 (ASU). Idaho. Twin Falls Co.: E side of U.S. Hwy 30, 6.8 km S of Bills, on basalt, 915 m alt., 11 Sept. 1998, B.D.Ryan 32953 (ASU). Nevada. Churchill Co.: US Hwy 50, N end of Desatoga Mountains, 84 m E of Fallon, 1830 m alt., July 1984, B.D.Ryan 11554 (MIN). North Dakota. Billings Co.: Theodore Rooselvelt Nat. Park, S. Unit One mile S of Paddock Creek along park road, on ridge E of road on scoria rock, 2500 ft. alt., 25 July 1982, C.Wetmore 45128 (MIN). Montana. Park Co.: Yellowstone National Park, Grazing enclosure 1 mile W of Gardiner at northern edge of park, open grassland on knoll with sagebrush and rock outcrop, 5300 ft. alt., 21 July 1998, C.Wetmore 80972 (MIN).
Protoparmeliopsis garovaglii was traditionally characterised by its typically elongate and strongly inflated-plicate lobes of the thalli. For most details, the species was studied by
During our study, we tried to trace the original collection of the species. Type citation in the protologue is: ‘An basaltigem Gestein “in monte supra Varzi” von Garovaglio gesammelt (Herb. Heufl.)’ [Italy, Prov. Pavia, Region of Lombardy, the mountain above Varzi city, on basalt rock, leg. Garovaglio] (Körber, 1859–1865). Heufler’s herbarium was sold after his death and currently the final destination of the samples is unknown. We started our enquiries at IBF where Haufler deposited much of his herbarium material during his lifetime. This did not bring any resolution as our double request did not elicit a response. We also requested the specimens of P. garovaglii from L herbarium. Subsequent to the request, we received the historical collection of P. garovaglii from the locality: Lower Austria, sunny slate rocks near Krems on the Danube River, alt. 250 m, 3 Jan. 1897, leg. Baumgarten. Obviously, the species cannot be lectotypified, as there is only one locality cited in the protologue and the original collection of the species from locus classicus could not be located at any herbaria and may have been lost. For name typification, we considered the collection available at L, however, its lowland origin and cortical chemistry (usnic and placodiolic acids) indicate that it would not be the best choice. We have also made a request at WRSL herbarium knowing that some small part of Körber’s collection is also located there. However, none of Körber’s specimens representing P. garovaglii was available. The most appropriate material for the neotype of the historical collections seen by us is apparently the exsiccate from WRSL, collected in the mountain area of Hungary and it was designated there. This specimen is well preserved, was collected from the basalt rock, has typical morphology suitable to the description given in the protologue and the following cortical chemistry: isousnic, usnic and placodiolic acids (the most frequent chemotype in Europe, according to
The species most closely related and likely to be confused with P. garovaglii is P. muralis. In contrast to P. garovaglii, the thallus of P. muralis is smaller and much more strongly attached to the substrate. Furthermore, thallus lobes of the latter species are distinctly shorter, flattened and thinner and not swollen or sinuous-plicate as they are in the case of P. garovaglii. Both species can also be distinguished by their chemistry. Protoparmeliopsis muralis contains usnic acid and zeorin but also atranorin, leucotylin, murolic and psoromic acids; the latter are not produced by P. garovaglii (
Protoparmeliopsis garovaglii was included in previous phylogenetic frameworks focused on European, North American and Asian populations (
In our study, we analysed differences in morphology, anatomy and chemistry of specimens representing different clades. European material is characterised by a pale green colour of the thallus with elongated, distinctly convex and swollen marginal lobes, which is not very closely attached to the substrate. The apothecial discs are epruinose, bright to dark brown in colour. Within material originating from Bolivia and Peru, we found very similar morphology of the apothecia and thallus, however the thallus colour of Bolivian specimens is more pale yellow than green. In North American, the thallus in many cases is smaller and more closely attached to the substrate, with flat, shorter and narrower marginal lobes (0.3–1.2 mm wide and 2–6 mm long) and is additionally pruinose at the ends. The colour of the discs is usually brown but also yellow-green or yellow-orange, when the upper surface of the thallus has more orange tint. No significant differences were found in the colour or height of the hymenium and epihymenium, nor the paraphyses or shape and size of spores in the specimens representing different clades. Furthermore, we have not found any correlation between secondary chemistry of the thallus and species distribution. Both specimens from Europe, South and North America (Bolivia, Peru and USA) contain zeorin and usnic acids as solid components, when isousnic and placodiolic acids, as well as unidentified terpenoides may be present or absent; however, no sample from South America contained isousnic acid.
Based on these observations, we may confirm great phenotypic variation of specimens representing P. garovaglii s.l., also observed by
We do not claim to assign any taxonomic resolutions concerning P. garovaglii s.l. until further molecular population studies provide evidence for species delimitation within the species-complex. The intention of the current study was to genetically support the identification of P. garovaglii in collections from areas of research interest to the authors. As a result, molecular evidence of the species occurrences in Poland and South America (Bolivia and Peru) was supplied. Typification of the epithet P. garovaglii, via this work, should be useful for further circumscription of related taxa.
The curators of ASU, L, MIN and WRSL are gratefully acknowledged for loan of specimens. PRF is greatly indebted to the Director of Herbario Nacional de Bolivia, Instituto de Ecología, Universidad Mayor de San Andrés, La Paz, for generous cooperation. We are grateful to Adam Flakus (Kraków) and Martin Kukwa (Gdańsk) for helpful assistance with TLC analyses. This work was supported by statutory funds of Wroclaw University of Environmental and Life Sciences and the W. Szafer Institute of Botany, Polish Academy of Sciences as well as by National Science Centre, Poland, project 2016/21/B/NZ8/02463.