Research Article |
Corresponding author: Hai-Sheng Yuan ( hsyuan@iae.ac.cn ) Academic editor: Cvetomir Denchev
© 2018 Hai-Sheng Yuan, Xu Lu, Cony Decock.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Yuan H-S, Lu X, Decock C (2018) Molecular and morphological evidence reveal a new genus and species in Auriculariales from tropical China. MycoKeys 35: 27-39. https://doi.org/10.3897/mycokeys.35.25271
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Grammatus labyrinthinus gen. et sp. nov. is proposed based on DNA sequences data and morphological characteristics. It is known so far from southern, tropical China. The new species is characterised by an annual, resupinate basidiocarp with a shallow, subporoid hymenophore, a hymenium restricted to the bottom of the tubes, a dimitic hyphal system, presence of encrusted skeletocystidia and dendrohyphidia, longitudinally septate basidia and smooth, oblong-ellipsoid to cylindrical, acyanophilous basidiospores. Phylogenetic analyses based on ITS + nLSU DNA sequences data indicate that G. labyrinthinus belongs to Auriculariaceae in which it has an isolated position. Phylogenetic inferences show G. labyrinthinus to be related to Heteroradulum. However, the ITS sequences similarity between G. labyrinthinus and H. kmetii, the type species of Heteroradulum, were 89.84% and support the establishment of the new genus. Inversely, Heteroradulum semis clustered with G. labyrinthinus with strong support and it is transferred to Grammatus.
Grammatus labyrinthinus , ITS and nLSU, lignicolous fungi, phylogeny, taxonomy
Auriculariales was established by
Auriculariaceae are diverse as long as their basidiocarp consistency (flesh gelatinous, wax-like and corky) and hymenophore structures (smooth, plicate, hydnoid and poroid) are concerned. According to the Dictionary of the fungi (10th edition), the family includes 7 genera: Auricularia Bull., Eichleriella Bres., Elmerina Bres., Exidia Fr., Exidiopsis (Bref.) Möller, Fibulosebacea K. Wells & Raitv., Heterochaete Pat. and 112 species (
Molecular phylogeny had been widely used to investigate phylogenetic relationships amongst the genera and species in Auriculariales (
China is very rich in wood-decaying fungi and extensive studies on species diversity, taxonomy, ecology and phylogeny of wood-decaying fungi have been carried out recently (
Morphological studies. Specimens are deposited at the herbarium of Institute of Applied Ecology, Chinese Academy of Sciences (IFP). Microscopic procedures follow
Molecular procedures and phylogenetic analyses. The fungal taxa and strains used in this study are listed in Table
Species | Collector/herbarium number |
ITS GenBank# |
LSU GenBank# |
Source |
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Amphistereum leveilleanum | Lentz FP-106715 (CFMR) | KX262119 | KX262168 |
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A. schrenkii | Burdsall 8476 (CFMR) | KX262130 | KX262178 |
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Aporpium hexagonoides | ML297 (TFM) | AB871754 | AB871735 |
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Auricularia cornea | AU110 | KF297960 | KF297995 | unpublished |
A. fuscosuccinea | MW530 | AB615231 | AF291291 |
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A. mesenterica | FO 25132 | AF291271 | AF291292 |
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A. mesenterica | TUFC12805 | AB915192 | AB915191 |
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A. polytricha | TUFC12920 | AB871752 | AB871733 |
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Basidiodendron caesiocinereum | MW 320 | – | AF291293 |
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B. eyrei | MW 529 | – | AF291296 |
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B. eyrei | TUFC14484 | AB871753 | AB871734 |
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Bourdotia galzinii | FO 2278 | – | AF291301 |
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Ductifera pululahuana | KW 1733 | – | AF291315 |
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Eichleriella alliciens | Burdsall 7194 (CFMR) | KX262120 | KX262169 |
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E. bactriana | I. Parmasto (TAAM 96698) | KX262123 | KX262172 |
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E. bactriana | E. Parmasto (TAAM 104431) | KX262138 | KX262186 |
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E. crocata | E. Parmasto (TAAM 101077) | KX262100 | KX262147 |
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E. crocata | E. Parmasto (TAAM 125909) | KX262118 | KX262167 |
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E. desertorum | Ryvarden 49350 (O) | KX262142 | KX262190 |
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E. flavida | Ryvarden 49412 (H) | KX262137 | KX262185 |
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E. leucophaea | Barsukova (LE 303261) | KX262111 | KX262161 |
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E. leucophaea | Larsson 15299 (O) | KX262136 | KX262184 |
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E. shearii | USJ 54609 | AF291284 | AF291335 |
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E. sicca | Miettinen 17349 (H) | KX262143 | KX262191 |
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E. tenuicula | Ryvarden 17599 (O) | KX262141 | KX262189 |
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Elmerina caryae | WD2207 | AB871751 | AB871730 |
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E. caryae | Dai 4549 | JQ764652 | JQ764631 |
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E. cladophora | Wei 5621 | JQ764659 | JQ764634 |
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E. dimidiata | O18238 | JQ764663 | JQ764640 |
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E. dimidiata | O18261 | JQ764664 | JQ764641 |
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E. efibulata | Dai 9322 | JQ764669 | JQ764647 |
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E. foliacea | Yuan 5691 | JQ764666 | JQ764644 |
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E. hispida | WD548 (TFM) | AB871768 | AB871749 |
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E. hispida | E701 | AB871767 | AB871748 |
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E. hispida | Wei 5584 | JQ764667 | JQ764645 |
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Exidia glandulosa | TUFC 34008 | AB871761 | AB871742 |
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E. glandulosa | MW 355 | AF291273 | AF291319 |
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E. pithya | MW 313 | AF291275 | AF291321 |
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E. uvapsassa | AFTOL-ID 461 | DQ241776 | AY645056 | unpublished |
Exidiopsis calcea | MW 331 | AF291280 | AF291326 |
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E. effusa | Miettinen 19136 (H) | KX262145 | KX262193 |
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E. grisea | RK 162 | AF291281 | AF291328 |
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E. grisea | TUFC100049 | AB871765 | AB871746 |
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E. sp. | TUFC34333 | AB871764 | AB871745 |
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E. sp. | FO 46291 | AF291282 | AF291329 |
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Grammatus labyrinthinus | Yuan 1759 | KM379137 | KM379138 | This study |
G. labyrinthinus | Yuan 1600 | KM379139 | KM379140 | This study |
Heterochaete andina | Lagerheim (FH, lectotype) | – | KX262187 |
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H. delicata | TUFC33717 | AB871766 | AB871747 |
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Heterochaetella brachyspora | RK 96 | – | AF291337 |
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Heteroradulum adnatum | Ryvarden 23453 (O) | KX262116 | KX262165 |
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H. deglubens | LE 38182 | KX262112 | KX262162 |
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H. deglubens | TAAM 064782 | KX262101 | KX262148 |
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H. kmetii | Kmet (H, lectotype) | KX262124 | KX262173 |
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H. kmetii | Spirin 6466 (H) | KX262104 | KX262152 |
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H. semis | Miettinen 10618.1 (H) | KX262146 | KX262194 |
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Myxarium grilletii | RK 218 | – | AF291349 |
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M. nucleatum | ZP TRE2M | – | AF291351 |
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Protodontia subgelatinosa | USJ 54661 | – | AF291357 |
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Protomerulius africanus | Ryvarden 9800 (O) | – | AF291358 |
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Pseudohydnum gelatinosum | MW 298 | – | AF291360 |
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Sclerotrema griseobrunneum | Niemelä 2722 (H) | KX262144 | KX262192 |
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Sistotrema brinkmannii | Isolate 236 | JX535169 | JX535170 | GenBank |
Tremellochaete japonica | LE 303446 | KX262110 | KX262160 |
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Tremellodendropsis sp. | USJ 54427 | – | AF291375 |
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Tremiscus helvelloides | MW 337 | – | AF291377 |
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Nuclear ribosomal RNA genes were used to determine the phylogenetic position of the new species. The internal transcribed spacer (ITS) regions were amplified with the primers ITS4 and ITS5 and the partial nLSU regions were amplified with primers LR7 and LR0R (
The combined ITS + nLSU sequence dataset includes the new species and other related species in Auriculariales. Sistotrema brinkmannii was used as outgroup (
Maximum likelihood tree illustrating the phylogeny of Grammatus labyrinthinus and related taxa in Auriculariales, based on the combined ITS + nLSU sequence dataset. Branches are labelled with maximum likelihood bootstrap higher than 50%, parsimony bootstrap proportions higher than 50% and Bayesian posterior probabilities more than 0.95.
Basidiocarps annual, resupinate; hymenophoral surface hydnoid, irregularly poroid to labyrinthine, hymenium restricted to the area surround the spines or the bottom of the tubes; Hyphal system dimitic; skeletocystidia heavily encrusted in trama; dendrohyphidia thin- to slightly thick-walled; basidia longitudinally septate; basidiospores thin-walled, smooth, oblong-ellipsoid to cylindrical.
Grammatus labyrinthinus H.S. Yuan & C. Decock.
grammatus: referring to the hymenophore striped with raised lines.
Basidiocarps annual, resupinate, coriaceous; hymenophoral surface cream to pale buff, covered by evenly distributed blunt-pointed spines or irregularly irpicoid to subporoid, then developing into labyrinthiform to sinuous pores; hymenium restricted to the area surrounding the spines or the bottom of the tubes. Subiculum very thin. Spine or tubes corky, concolorous with hymenophoral surface, shallow. Hyphal system dimitic; generative hyphae bearing clamp connections; skeletal hyphae IKI–, CB+; tissue unchanged in KOH. Skeletocystidia clavate, upper part heavily encrusted. Dendrohyphidia present. Basidia subglobose, longitudinally septate. Basidiospores oblong-ellipsoid to cylindrical, hyaline, thin-walled, smooth, IKI–, CB–.
Basidiocarps annual, resupinate; hymenium restricted to the base of the tubes. Hymenophoral surface irregularly irpicoid to subporoid, then labyrinthine to sinuous. Subiculum very thin. Tubes shallow. Hyphal system dimitic; generative hyphae bearing clamp connections; skeletal hyphae IKI–, CB+. Skeletocystidia clavate, the upper part heavily encrusted. Dendrohyphidia present, thin- to slightly thick-walled. Basidia subglobose, longitudinally septate. Basidiospores oblong-ellipsoid to cylindrical, hyaline, thin-walled, smooth, IKI–, CB–.
China. Yunnan Province, Xishuangbanna, Jinghong County, Nabanhe Nat. Res., fallen angiosperm branch, 17.VIII.2005 Yuan 1759 (holotype: IFP 019121).
labyrinthinus (Lat.): refers to labyrinthine hymenophore.
Basidiocarps annual, resupinate, coriaceous, without special odour or taste when fresh, corky when dry, up to 15 cm long, 3 cm wide and 0.2 mm thick. Hymenophoral surface cream to pale buff when fresh, cinnamon-buff to yellowish-brown upon drying, firstly irregularly irpicoid to subporoid, the separate plates grow laterally and then develop into labyrinthine to sinuous pores, mostly 4–5 per mm, dissepiments thin; sterile margin up to 0.2 mm wide, pale yellow. Subiculum very thin (ca. 0.1 mm thick), cream to pale buff. Tubes corky, concolorous with pore surface, shallow, up to 130 µm deep, tube walls 120–200 µm thick. Hymenium restricted to the base of the tubes.
Hyphal structure. Hyphal system dimitic; generative hyphae bearing clamp connections, skeletal hyphae IKI–, CB+; tissue unchanged in KOH.
Subiculum. Dominated by skeletal hyphae; generative hyphae hyaline, thin-walled, rarely branched, 1.5–2.8 µm diam; skeletal hyphae hyaline, thick-walled to subsolid, straight to flexuous, covered by fine crystals, occasionally branched, interwoven, 1.8–3 µm diam.
Tubes. Generative hyphae infrequent, hyaline, thin-walled, rarely branched, 1.5–2.5 μm diam; skeletal hyphae dominant, hyaline, thick-walled to subsolid, moderately branched, interwoven, 1.8–2.8 μm diam. Skeletocystidia numerous, clavate, thick-walled, originating from and tightly embedded in trama, upper part heavily encrusted, 10–30 × 4–8 µm (with encrustation). Dendrohyphidia present, especially along the dissepiments, arising from generative hyphae, thin- to slightly thick-walled, apically moderately to strongly branched. Basidia subglobose, longitudinally septate, already septate as probasidia, 18–25 × 10–13 μm, epibasidia divided into four parts up to 20 μm long, bearing four sterigmata and without clamp connection at the base, sterigmata up to 20 μm long.
Basidiospores. Oblong-ellipsoid to cylindrical, hyaline, thin-walled, smooth, IKI–, CB–, (13–)13.3–15.7(–16) × (6–)6.4–7.4(–7.7) μm, L = 14.4 μm, W = 6.94 μm, Q = 2.07–2.1 (n = 60/2).
White rot.
Additional specimens examined – China. Yunnan Province, Xishuangbanna, Jinghong County, Elephant Valley Forest Park, fallen angiosperm branch, 14.VIII.2005 Yuan 1600 (IFP 019118); Nabanhe Nat. Res., fallen angiosperm branch, 15.VIII.2005 Yuan 1683 (IFP 019119); fallen angiosperm branch, 17.VIII.2005 Yuan 1734 (IFP 019120).
Heteroradulum semis Spirin & Malysheva, in Malysheva & Spirin, Fungal Biology 121: 712. 2017.
Anatomically, the longitudinally septate basidia of Grammatus labyrinthinus point toward affinities with Auriculariales, which is confirmed by molecular data. The new taxa are phylogenetically closely related to Heteroradulum. Heteroradulum kmetii, type of the genus, has perennial, effused-reflexed and pinkish or reddish basidiocarps with hymenial surface first smooth then with irregularly arranged, sharpened outgrowths (
Heteroradulum semis was originally found and described from high elevation temperate north-eastern China. It is characterised by resupinate, leathery basidiocarps covered by blunt-pointed spines, a dimitic hyphal structure with clamped generative hyphae, encrusted tramal skeletocystidia, simple or sparsely branched dendrohyphidia, longitudinally septate basidia and broadly cylindrical to narrowly obovate basidiospores (
Aporpium, Elmerina and Protomerulius Möller all have a poroid hymenophore (
There are 216 genera and more than 1800 species of wood-inhabiting fungi in Polyporales (
We thank Dr. Hancheng Wang (Chongqing Normal University, China) for accompanying us during the field trips. This research was financed by the National Natural Science Foundation of China (Project Nos. 31470148 & 31770028).