Research Article |
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Corresponding author: Li-Jun Chen ( clj102128@163.com ) Corresponding author: Jian Ma ( yanmajian@163.com ) Academic editor: Xin-Cun Wang
© 2025 Song Bai, Fang Wang, Su-Ran Wan, Xiao-Kang Lv, Li-Jun Chen, Rong Wu, Jian Ma.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Bai S, Wang F, Wan S-R, Lv X-K, Chen L-J, Wu R, Ma J (2025) Two novel Helicosporium species (Tubeufiaceae, Tubeufiales) from southern China based on morphological and molecular evidence. MycoKeys 124: 159-176. https://doi.org/10.3897/mycokeys.124.168933
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During a survey of saprobic fungi, fresh specimens were collected from decaying wood in terrestrial habitats in Guizhou and Hainan provinces, southern China. Two novel species, Helicosporium qixianlingense and H. tongrenense, are introduced based on phylogenetic analyses of a combined dataset (ITS, LSU, tef1-α, and rpb2) and morphological evidence. Comprehensive descriptions, illustrations, notes, and phylogenetic analyses supporting the taxonomic placement of these new taxa are provided. These findings are significant for exploring the species diversity of Helicosporium in southern China.
Dothideomycetes, helicosporous fungi, phylogeny, taxonomy, two novel species
Tubeufiales (Pleosporomycetidae, Dothideomycetes) was established by
Tubeufiaceae, typified by Tubeufia (
Based on morphological evidence, the genus Helicosporium was established by
In this study, four newly obtained fungal isolates, representing two distinct Helicosporium taxa within the family Tubeufiaceae (Tubeufiales, Dothideomycetes), were collected from decaying wood in southern China. Based on morphological comparisons, illustrations, and multigene phylogenetic analyses of combined ITS, LSU, tef1-α, and rpb2 sequence data, two novel species, Helicosporium qixianlingense and H. tongrenense, are introduced in the present study.
Decaying wood was collected from Qixianling Hot Spring National Forest Park, Hainan Province, and Jiangkou County, Guizhou Province, in southern China. Samples were transported to the laboratory in plastic bags, accompanied by collection details such as locality, habitat, and date (
Single-spore isolations were conducted on potato dextrose agar (PDA) plates following the protocols of
Fresh fungal mycelia were scraped from PDA-grown colonies and transferred to 1.5-mL microcentrifuge tubes using sterilized lancets for genomic DNA extraction. DNA was extracted with the Biospin Fungus Genomic DNA Extraction Kit (BioFlux, China). The following primer pairs were used for PCR amplification: ITS5/ITS4 for the internal transcribed spacer region (ITS;
The newly obtained sequences were quality-checked and assembled using BioEdit v.7.0.5.3 (
| Taxon | Strain | GenBank Accessions | |||
|---|---|---|---|---|---|
| ITS | LSU | tef1-α | rpb2 | ||
| Acanthohelicospora aurea | GZCC 16-0060 | KY321323 | KY321326 | KY792600 | MF589911 |
| Acanthostigma chiangmaiensis | MFLUCC 10-0125T | JN865209 | JN865197 | KF301560 | N/A |
| Acanthostigma perpusillum | UAMH 7237 | AY916492 | AY856892 | N/A | N/A |
| Berkleasmium aquaticum | MFLUCC 17-0049T | KY790444 | KY790432 | KY792608 | MF535268 |
| Berkleasmium fusiforme | MFLUCC 17-1978T | MH558693 | MH558820 | MH550884 | MH551007 |
| Boerlagiomyces macrospora | MFLUCC 12-0388 | KU144927 | KU764712 | KU872750 | N/A |
| Botryosphaeria agaves | MFLUCC 10-0051 | JX646790 | JX646807 | N/A | N/A |
| Botryosphaeria dothidea | CBS 115476 | KF766151 | DQ678051 | DQ767637 | DQ677944 |
| Camporesiomyces bhatii | GMBCC 1120T | PQ763360 | PQ842543 | PV388894 | PV388888 |
| Chlamydotubeufia cylindrica | MFLUCC 16-1130T | MH558702 | MH558830 | MH550893 | MH551018 |
| Chlamydotubeufia huaikangplaensis | MFLUCC10-0926T | JN865210 | JN865198 | N/A | N/A |
| Dematiohelicomyces helicosporus | MFLUCC 16-0213T | KX454169 | KX454170 | KY117035 | MF535258 |
| Dematiohelicosporum guttulatum | MFLUCC 17-2011T | MH558705 | MH558833 | MH550896 | MH551021 |
| Dematiotubeufia chiangraiensis | MFLUCC 10-0115T | JN865200 | JN865188 | KF301551 | N/A |
| Helicangiospora lignicola | MFLUCC 11-0378T | KF301523 | KF301531 | KF301552 | N/A |
| Helicoarctatus aquaticus | MFLUCC 17-1996T | MH558707 | MH558835 | MH550898 | MH551024 |
| Helicohyalinum aquaticum | MFLUCC 16-1131T | KY873625 | KY873620 | KY873284 | MF535257 |
| Helicohyalinum infundibulum | MFLUCC 16-1133T | MH558712 | MH558840 | MH550903 | MH551029 |
| Helicoma guttulatum | MFLUCC 16-0022T | KX454171 | KX454172 | MF535254 | MH551032 |
| Helicoma hongkongense | MFLUCC 17-2005 | MH558716 | MH558843 | MH550907 | MH551033 |
| Helicosporium acropleurogenum | CGMCC 3.25563T | PP626574 | PP639430 | PP596333 | PP596460 |
| Helicosporium aquaticum | MFLUCC 17-2008T | MH558733 | MH558859 | MH550924 | MH551049 |
| Helicosporium brunneisporum | CGMCC 3.25542T | PP626577 | PP639433 | PP596336 | PP596463 |
| Helicosporium changjiangense | GZCC 22-2113T | PP626578 | PP639434 | PP596337 | PP596464 |
| Helicosporium flavisporum | MFLUCC 17-2020T | MH558734 | MH558860 | MH550925 | MH551050 |
| Helicosporium flavum | MFLUCC 16-1230T | KY873626 | KY873621 | KY873285 | N/A |
| Helicosporium hainanense | GZAAS 22-2006T | OP508730 | OP508770 | OP698081 | OP698070 |
| Helicosporium jiangkouense | HKAS 128933T | PP626580 | PP639436 | PP596339 | PP596466 |
| Helicosporium latisporum | HKAS 128960T | PP626582 | PP639437 | PP596340 | PP596467 |
| Helicosporium liuzhouense | GZCC 22-2014T | OQ981394 | OQ981402 | OQ980476 | OQ980474 |
| Helicosporium luteosporum | MFLUCC 16-0226T | KY321324 | KY321327 | KY792601 | MH551056 |
| Helicosporium multidentatum | GZCC 22-2013T | OQ981395 | OQ981403 | OQ980477 | OQ980475 |
| Helicosporium multiseptatum | GUCC 24-0090T | PQ570843 | PQ570860 | PQ761135 | N/A |
| Helicosporium nanningense | GZCC 22-2175T | OR066418 | OR066425 | OR058864 | OR058857 |
| Helicosporium qixianlingense | GZCC 25-0641T | PX111181 | PX111188 | PX102605 | PX102599 |
| Helicosporium qixianlingense | GZCC 25-0642 | PX111182 | PX111189 | PX102606 | PX102600 |
| Helicosporium ramosiphorum | CGMCC 3.25541T | PP626576 | PP639432 | PP596335 | PP596462 |
| Helicosporium rubrum | MFLUCC 24-0090T | PQ098477 | PQ098514 | PQ490681 | PQ490675 |
| Helicosporium setiferum | MFLUCC 17-1994T | MH558735 | MH558861 | MH550926 | MH551051 |
| Helicosporium sexuale | MFLUCC 16-1244T | MZ538503 | MZ538537 | MZ567082 | MZ567111 |
| Helicosporium sp. | NBRC 9014 | AY916489 | AY856903 | N/A | N/A |
| Helicosporium sp. | Z17 | PX220122 | PX220124 | N/A | N/A |
| Helicosporium thailandense | MFLUCC 18-1407T | MT627698 | MN913718 | MT954371 | N/A |
| Helicosporium tongrenense | GZCC 23-0026T | PQ098476 | PQ098513 | PX102603 | PX102597 |
| Helicosporium tongrenense | GZCC 25-0640 | PX111180 | PX111187 | PX102604 | PX102598 |
| Helicosporium vegetum | GZCC 23-0060 | PP626584 | PP639439 | PP596342 | PP596469 |
| Helicosporium vesicarium | MFLUCC 17-1795T | MH558739 | MH558864 | MH550930 | MH551055 |
| Helicosporium viridiflavum | MFLUCC 17-2336T | MH558738 | N/A | MH550929 | MH551054 |
| Helicosporium viridisporum | GZCC 22-2008T | OP508736 | OP508776 | OP698087 | OP698076 |
| Helicotubeufia hydei | MFLUCC 17-1980T | MH290021 | MH290026 | MH290031 | MH290036 |
| Helicotubeufia jonesii | MFLUCC 17-0043T | MH290020 | MH290025 | MH290030 | MH290035 |
| Muripulchra aquatica | MFLUCC 15-0249T | KY320532 | KY320549 | N/A | N/A |
| Neoacanthostigma fusiforme | MFLUCC 11-0510T | KF301529 | KF301537 | N/A | N/A |
| Neochlamydotubeufia fusiformis | MFLUCC 16-0016T | MH558740 | MH558865 | MH550931 | MH551059 |
| Neohelicomyces acropleurogenus | CGMCC 3.25549T | PP626594 | PP639450 | PP596351 | PP596478 |
| Neohelicomyces aquaticus | MFLUCC 16-0993T | KY320528 | KY320545 | KY320561 | MH551066 |
| Neohelicosporium acrogenisporum | MFLUCC 17-2019T | MH558746 | MH558871 | MH550937 | MH551069 |
| Neohelicosporium aquaticum | MFLUCC 17-1519T | MF467916 | MF467929 | MF535242 | MF535272 |
| Neomanoharachariella xizangensis | KUNCC 23-15799T | OR803724 | OR803722 | OR813978 | OR813975 |
| Parahelicomyces quercus | MFUCC 17-0895T | MK347720 | MK347934 | MK360077 | MK434906 |
| Parahelicomyces talbotii | MFLUCC 17-2021T | MH558765 | MH558890 | MH550957 | MH551091 |
| Tubeufia guttulata | GZCC 23-0404T | OR030841 | OR030834 | OR046678 | OR046684 |
| Tubeufia hainanensis | GZCC 22-2015T | OR030842 | OR030835 | OR046679 | OR046685 |
Maximum likelihood (ML) analysis was conducted using the IQ-TREE web server (http://iqtree.cibiv.univie.ac.at/) with the best-fit substitution model automatically selected based on the Bayesian Information Criterion (BIC) (
Phylogenetic trees were visualized using FigTree v.1.4.4 and subsequently edited with Adobe Illustrator CC 2019 (v.23.1.0; Adobe Systems, USA).
The phylogenetic positions of the four novel strains were assessed using a multilocus phylogenetic approach. The concatenated sequence matrix comprised 3,346 nucleotide positions (ITS: 1–539, LSU: 540–1389, tef1-α: 1390–2301, and rpb2: 2302–3346), incorporating 61 ingroup taxa and two outgroup taxa, Botryosphaeria agaves (MFLUCC 10–0051) and B. dothidea (CBS 115476). Both maximum likelihood (ML) and Bayesian inference (BI) analyses of the combined ITS, LSU, tef1-α, and rpb2 datasets yielded congruent tree topologies. The best-scoring ML tree (Fig.
Phylogenetic tree generated using RAxML analysis based on the concatenated ITS, LSU, tef1-α, and rpb2 sequence data. Bootstrap support values (MLBS) ≥ 75% and Bayesian posterior probabilities (BYPP) ≥ 0.95 are indicated near the nodes as MLBS/BYPP, respectively. A hyphen (–) denotes support values below 75% for ML and posterior probabilities below 0.95 for BI. Botryosphaeria agaves (MFLUCC 10–0051) and B. dothidea (CBS 115476) were used as outgroups. Ex-type strains are marked with “T,” and newly obtained isolates are highlighted in bold black font.
Phylogenetic analyses of the phylogram (Fig.
‘‘qixianlingense” refers to the place ‘‘Qixianling Hot Spring National Forest Park,” from where the holotype was collected.
GZAAS 25–0671
Saprobic on decaying wood in a terrestrial habitat. Sexual morph Undetermined. Asexual morph Hyphomycetous, helicosporous. Colonies on natural substrate superficial, effuse, gregarious, yellowish green to brown. Mycelium partly immersed, partly superficial, composed of pale brown to brown, branched, septate, guttulate, smooth hyphae. Conidiophores 132–144 × 3.7–4.8 μm (x̄ = 139 × 5.5 μm, n = 30), macronematous, mononematous, erect, cylindrical, long, straight or slightly flexuous, simple, septate, brown to dark brown at base, paler towards the apex, smooth, thick-walled. Conidiogenous cells 4.5–10 × 3–4.4 μm (x̄ = 8 × 3.6 μm, n = 30), holoblastic, monoblastic, or polyblastic, integrated, intercalary, cylindrical, denticulate, arising laterally from the lower portion of conidiophores as tiny bladder-like protrusions (3–4 µm long, 2–2.7 µm wide), with each bearing 1–2 tiny sporogenous conidiogenous loci, hyaline to pale brown, smooth. Conidia solitary, pleurogenous, helicoid, tapering towards the rounded ends, developing on bladder-like protrusion, 11.7–12 μm in diameter, and conidial filament 1.2–2.1 μm wide (x̄ = 11.9 × 1.7 μm, n = 30), 72.5–84 μm long (x̄ = 76.5 μm, n = 35), up to 41/2 times, becoming loosely coiled when the conidia are young and not becoming loose when mature in water, indistinctly multi-septate, guttules, hyaline, smooth-walled.
Helicosporium qixianlingense (GZAAS 25–0671, holotype). a, b. Colonies on the host surface; c–f. Conidiophores and conidiogenous cells; g–l. Conidiogenous cells; m–q. Conidia; r. A germinated conidium; s, t. Colonies on PDA from above and below after 44 days of incubation at room temperature. Scale bars: 30 μm (c–f); 10 μm (r); 5 μm (g–q).
Conidia germinating on PDA within 11 hours, producing germ tubes from the conidial body. Colony on PDA reaching 3.2 cm in diameter after 44 days at room temperature (approximately 25 °C), circular or irregular, umbonate, with an undulate margin, and pale brown to light pinkish in color.
• China, Hainan Province, Baoting Li and Miao Autonomous County, Qixianling Hot Spring National Forest Park, on decaying wood in a terrestrial habitat, 2 November 2024, Jian Ma Q23 (GZAAS 25–0671, holotype), ex-type living cultures GZCC 25–0641; Ibid., Q39 (GZAAS 25–0672, paratype), living culture GZCC 25–0642.
In the phylogenetic analyses (Fig.
‘‘tongrenense” refers to the place ‘‘Tongren City,” from where the holotype was collected.
HKAS 128925
Saprobic on decaying wood in a terrestrial habitat. Asexual morph Undetermined. Sexual morph: Ascomata superficial, seated on a subiculum, solitary, scattered, globose to subglobose, bright reddish yellow to brown yellow, with central narrow ostiole, no observed setae. Peridium composed of several layers of brown to dark brown cells of textura angularis, outer layer brown cells, and inner layer pale brown to hyaline cells. Hamathecium comprising numerous, filiform, septate, branched, hyaline pseudoparaphyses. Asci 90.5–143 × 11.5–14.5 µm (x̄ = 107.5 × 13 μm, n = 20), 8-spored, bitunicate, fissitunicate, cylindrical to clavate, short-pedicellate, apically rounded, basally flexious. Ascospores 37–48 × 3.5–5.5 µm (x̄ = 43 × 4 μm, n = 20), overlapping 2–3 seriate, elongate-fusiform, tapering towards narrow, widest at the central part, subacute ends, straight to slightly curved, guttules, multi-septate, hyaline, smooth-walled.
Helicosporium tongrenense (HKAS 128925, holotype). a. Ascomata on host surface; b–d. Vertical sections of ascomata and peridium; e–h. Asci; i–n. Ascospores; o, p. Colonies on PDA from above and below after 3 months of incubation at room temperature. Scale bars: 50 µm (b–e), 20 µm (f–h), 10 µm (i–n).
Ascospores germinating on PDA, producing germ tubes within 19 hours. Colony on PDA reaching 0.7 cm diameter after 90 days at room temperature (approximately 25 °C), circular or irregular, flat, with an entire margin, and pale brown to yellowish brown in color.
• China, Guizhou Province, Tongren City, Jiangkou County, on decaying wood in a terrestrial habitat, 20 May 2022, Xia Tang, JK1.1 (HKAS 128925 = GZAAS 23–0027, holotype), ex-type living cultures GZCC 23–0026; Ibid., JK4 (GZAAS 25–0670, paratype), living culture GZCC 25–0640.
Morphologically, Helicosporium tongrenense (HKAS 128925) resembles H. flavum (MFLU 17–0704) in having solitary, scattered, globose to subglobose, bright reddish-yellow to brown-yellow ascomata; 8-spored, bitunicate, fissitunicate, cylindrical to clavate asci; and elongate-fusiform, straight to slightly curved, multi-septate, hyaline ascospores (
Based on molecular data and/or morphological characteristics, the genus Helicosporium currently comprises 32 species, including our new species, H. qixianlingense and H. tongrenense (
Previous studies have reported that secondary metabolites of Helicosporium species exhibit antibacterial activity against both bacteria and fungi (
The asexual morphs of Helicosporium exhibit considerable variation in conidial filament width (
We thank Shaun Pennycook (Manaaki Whenua Landcare Research, New Zealand) for his valuable suggestions on fungal nomenclature.
The authors have declared that no competing interests exist.
No ethical statement was reported.
No use of AI was reported.
This work was supported by the Guizhou Industry Polytechnic College Faculty-level Research Project (Grant No. 2024ZK18), the Science and Technology Planning Project of Guizhou Province (Grant No. Qian Ke He Ji Chu ZK [2022] Zhong Dian 025), and the High-Level Talent Initial Funding of Guizhou Industry Polytechnic College (Grant No. 2023-RC-01).
Morphological data, photo-plates and phylogenetic analyzes were completed by Song Bai and Jian Ma. The original draft was written by Song Bai and Jian Ma, and Fang Wang, Su-Ran Wan , Xiao-Kang Lv, Li-Jun Chen , Rong Wu revised the paper.
Song Bai https://orcid.org/0000-0002-1972-2834
Fang Wang https://orcid.org/0000-0002-3341-6788
Su-Ran Wan https://orcid.org/0009-0000-1164-6921
Xiao-Kang Lv https://orcid.org/0009-0006-7254-8747
Li-Jun Chen https://orcid.org/0009-0004-8562-875X
All of the data that support the findings of this study are available in the main text.