Research Article |
Corresponding author: Yan-Feng Han ( swallow1128@126.com ) Academic editor: Marc Stadler
© 2024 Wan-Hao Chen, Dan Li, Jian-Dong Liang, Xiu-Xiu Ren, Jie-Hong Zhao, Yan-Feng Han.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Chen W-H, Li D, Liang J-D, Ren X-X, Zhao J-H, Han Y-F (2024) Two new Cordyceps-like species, Perennicordyceps zongqii sp. nov. (Polycephalomycetaceae) and Purpureocillium zongqii sp. nov. (Ophiocordycipitaceae), in Hypocreales from karst region of China. MycoKeys 110: 141-158. https://doi.org/10.3897/mycokeys.110.135724
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Two new Cordyceps-like species, Perennicordyceps zongqii and Purpureocillium zongqii, isolated from a larva and soil, are introduced. Morphological comparisons and phylogenetic analyses based on multigene datasets (ITS, LSU, RPB2 and TEF) support the establishment of the new species. Moreover, new species in the families Polycephalomycetaceae and Ophiocordycipitaceae were introduced into Tiankeng and the valley for the first time. Further attention needs to be paid to the diversity of other Cordyceps-like fungi in the special eco-environment of the karst region.
Cordyceps-like species, morphology, Ophiocordycipitaceae, phylogenetic analysis, Polycephalomycetaceae
Cordyceps-like fungi, also known as Cordyceps sensu lato, refers to species belonging to Hypocreales, Sordariomycetes and Ascomycota, and contains all the species in the families Cordycipitaceae, Ophiocordycipitaceae and Polycephalomycetaceae, as well as some species in the family Clavicipitaceae (
The karst region, especially in southern China, preserves unique, large-scale, and continuously distributed primitive forests with extremely rich biodiversity. The complex ecological environment and special geographical conditions in the region have become shelters for many unique species (
During a survey of Cordyceps-like fungi associated with insects and soil from Southwest China, the infected specimen and soil were collected, and strains were isolated. After detailed multiloci phylogenic analysis and morphological observations, two new species were identified as belonging to the family Polycephalomycetaceae and Ophiocordycipitaceae.
The specimen and soil (for the photo descriptions of the sampling site see Suppl. materials
Colony morphology was determined on PDA cultures incubated at 25 °C for 14 days and the growth rate, the presence of octahedral crystals and the colony colours (surface and reverse) were observed. To investigate the microscopic characteristics, a little of the mycelia was picked up from the colony and mounted in lactophenol cotton blue or 20% lactate acid solution and the asexual morphological characteristics (e.g., conidiophores, phialides and conidia) were observed and measured using a Leica DM4 B microscope. Twenty measurements were recorded for hyphae, conidiophores, phialides and conidium.
DNA extraction was carried out using a fungal genomic DNA extraction kit (DP2033, BioTeke Corporation) according to
List of strains and GenBank accession numbers of sequences used in this study.
Species | Strain | Host/ substrate | GenBank Accession Number | Reference | |||
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ITS | LSU | RPB2 | TEF | ||||
Perennicordyceps cuboidea | NBRC 103836 | Larva of beetle | JN943332 | JN941420 | AB972955 | AB972951 |
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Perennicordyceps cuboidea | NBRC 100941 | stroma of Cordyceps stylophora | JN943329 | JN941416 | – | – |
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Perennicordyceps cuboidea | NBRC 101740 | Larva of beetle | JN943331 | JN941417 | – | KF049684 |
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Perennicordyceps elaphomyceticola | MFLU 21-0264 | Elaphomyces sp. | OQ172067 | OQ172035 | OQ459794 | OQ459720 |
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Perennicordyceps elaphomyceticola | MFLU 21-0263 | Elaphomyces sp. | OQ172065 | OQ172033 | OQ459793 | OQ459719 |
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Perennicordyceps elaphomyceticola | MFLU 21-0262 | Elaphomyces sp. | OQ172064 | OQ172032 | OQ459792 | OQ459718 |
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Perennicordyceps lutea | KUMCC 3004T | Ophiocordyceps sinensis | – | OQ474910 | – | – |
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Perennicordyceps paracuboidea | NBRC 101742T | Larva of beetle | JN943338 | JN941431 | KF049669 | KF049685 |
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Perennicordyceps paracuboidea | NBRC 100942 | Larva of beetle | JN943337 | JN941430 | AB972958 | AB972954 |
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Perennicordyceps prolifica | NBRC 101750 | Larva of Tanna japonensis | JN943340 | JN941433 | AB972957 | AB972953 |
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Perennicordyceps prolifica | NBRC 100744 | Larva of Tanna japonensis | AB925942 | JN941432 | AB972956 | AB972952 |
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Perennicordyceps prolifica | TNS-F-18547 | Larvae of cicada | KF049660 | KF049632 | KF049670 | KF049687 |
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Perennicordyceps ryogamiensis | NBRC 101751 | Larva of beetle | JN943343 | JN941438 | – | KF049688 |
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Perennicordyceps ryogamiensis | NBRC 103837 | Larva of beetle | JN943346 | JN941439 | – | – |
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Perennicordyceps ryogamiensis | NBRC 103842 | Cordyceps ryogamiensis | JN943345 | JN941440 | – | – |
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Perennicordyceps zongqii | DY05421T | Larva of moth | PQ211278 | PQ211282 | PQ223677 | PQ223679 | This study |
Perennicordyceps zongqii | DY05422 | Larva of moth | PQ211279 | PQ211283 | PQ223678 | PQ223680 | This study |
Pleurocordyceps parvicapitata | MFLU 21-0270 | Elaphomyces sp. | OQ172082 | OQ172054 | OQ459796 | OQ459722 |
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Pleurocordyceps parvicapitata | MFLU 21-0271T | Elaphomyces sp. | OQ172083 | OQ172055 | OQ459797 | OQ459723 |
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Pleurocordyceps sinensis | HMAS 43720T | Larvae of Hepialus armocanus | NR_119928 | NG_042573 | – | – |
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Pleurocordyceps vitellina | KUMCC 3006T |
Ophiocordyceps
nigrella |
OQ172089 | OQ172061 | OQ459803 | OQ459729 |
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Pleurocordyceps vitellina | KUMCC 3007 |
Ophiocordyceps
nigrella |
OQ172090 | OQ172062 | OQ459804 | OQ459730 |
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Polycephalomyces formosus | NBRC 109993T | Larvae of Coleoptera | MN586833 | MN586842 | MN598064 | MN598057 |
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Polycephalomyces albiramus | GACP 21-XS08T | Gryllotalpa | OQ172092 | OQ172037 | OQ459807 | OQ459735 |
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Polycephalomyces albiramus | GACPCC 21-XS08 | Gryllotalpa | OQ172093 | OQ172038 | OQ459808 | OQ459736 |
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Purpureocillium atypicola | CBS 744.73 | Atypus karschi | GU980041 | EF468841 | – | EF468786 |
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Purpureocillium jiangxiense | JX17D04 | Soil | PP555636 | PP555645 | – | PP658209 |
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Purpureocillium jiangxiense | JX13B01T | Soil | PP555637 | PP555646 | – | PP658210 |
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Purpureocillium lavendulum | FMR 10376T | Soil | FR734106 | – | – | FR775516 |
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Purpureocillium lavendulum | CBS 128678 | Human | MH864977 | MH876430 | – | – |
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Purpureocillium lilacinum | CBS 284.36T | Soil | FR734101 | – | – | FR734156 |
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Purpureocillium lilacinum | FMR 8652 | Human | FR734090 | FR775473 | – | – |
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Purpureocillium roseum | IOM 325363.1 | Human | MT560195 | MT560197 | – | – |
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Purpureocillium roseum | IOM 325363.2 | Human | MT560196 | MT560198 | – | – |
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Purpureocillium sodanum | IBRC-M 30175T | Salt crystals | KX668542 | – | – | – |
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Purpureocillium takamizusanense | NBRC 100742 | Tanna japonensis | LC008197 | – | – | LC008333 |
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Purpureocillium takamizusanense | NBRC 108982 | Cicada | LC008204 | – | – | LC008338 |
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Purpureocillium takamizusanense | NBRC 110232 | - | LC008205 | – | – | LC008339 |
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Purpureocillium zongqii | TK041T | Soil | PQ211280 | PQ211284 | – | PQ223681 | This study |
Purpureocillium zongqii | TK042 | Soil | PQ211281 | PQ211285 | – | PQ223682 | This study |
Simplicillium lamellicola | CBS 116.25T | Agaricus bisporus | MH854806 | AF339552 | DQ522462 | DQ522356 |
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Simplicillium lanosoniveum | CBS 704.86 | Hemileia vastatrix | AJ292396 | AF339553 | DQ522464 | DQ522358 |
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DNASTAR™ Lasergene (v 6.0) was used to edit DNA sequences in this study. The ITS, LSU, RPB2 and TEF sequences were downloaded from GenBank, based on
The combined dataset of ITS, LSU, RPB2 and TEF sequence data (Suppl. materials
The phylogenetic tree (Fig.
The selected model for ML analysis was TN+F+I+G4. The final value of the highest scoring tree was –15,988.941, which was obtained from an ML analysis of the dataset (ITS, LSU, RPB2 and TEF). The parameters of the rate heterogeneity model used to analyze the dataset were estimated using the following frequencies: A = 0.230, C = 0.288, G = 0.278, T = 0.204; substitution rates AC = 1.00000, AG = 2.57904, AT = 1.00000, CG = 1.00000, CT = 5.70221 and GT = 1.00000, as well as the gamma distribution shape parameter α = 0.805. The selected models for BI analysis were GTR+F+I+G4 (ITS, LSU, RPB2 and TEF). The phylogenetic trees (Fig.
China • Guizhou Province, Qiannan Buyei and Miao Autonomous Prefecture, Duyun City, Mayao River Valley (26°22'8.3748"N, 107°23'16.96"E), on a larva of moth (Lepidoptera), on the leaf litter, 1 May 2022, Wanhao Chen, GZAC DY0542 (holotype), ex-type DY05421.
Colonies on PDA, attaining a diameter of 56–59 mm after 14 days at 25 °C, white, consisting of a basal felt, floccose hyphal overgrowth, yellowish in middle; reverse yellow to pale yellowish, light brown to brown in the middle. Hyphae septate, hyaline, yellowish in the middle part of the colony, smooth-walled, 1.1–2.1 μm wide. Conidiophores erect, hyaline, irregular branched, with 1–4 phialides. Phialides 29.3–31.1 × 1.5–2.4 μm, hyaline, cylindrical at base, gradually tapering near the apex, holoblastic or branch. Conidia 3.4–4.8 × 2.5–2.7 μm, hyaline, smooth-walled, thin-walled, ellipsoidal to cylindrical, unicellular, acuminate, arranged in chains not observed.
Duyun City, Guizhou Province, China.
Larva (Lepidoptera).
China • Guizhou Province, Qiannan Buyei and Miao Autonomous Prefecture, Duyun City, Mayao River Valley (26°22'8.3748"N, 107°23'16.96"E). On a larva of moth (Lepidoptera), on the leaf litter, 1 May 2022, Wanhao Chen, DY05422 (living culture).
Strain DY05421 was easily identified as Perennicordyceps, based on the BLASTn result in NCBI. Phylogenetic analyses show that strain DY05421 has close relationships to P. cuboidea and P. ryogamiensis (Fig.
China • Guizhou Province, Guiyang, Kaiyang County, Monkey-Ear Tiankeng (27°5'12.138"N, 107°0'48.42"E), soil, 19 July 2023, Wanhao Chen, GZAC TK04 (dried holotype), ex-type TK041.
Colonies on PDA, attaining a diameter of 23–25 mm after 14 days at 25 °C, white, consisting of a basal felt, floccose hyphal overgrowth, white; reverse yellowish. Hyphae septate, hyaline, smooth-walled, 1.1–1.9 μm wide. Conidiophores 9.3–12.7 × 2.1–2.4 μm, erect, hyaline, verticillately branched, with 1–4 phialides. Phialides 6.8–11.7 × 2.6–4.0 μm, hyaline, cylindrical at base, gradually tapering near the apex. Conidia 2.7–4.2 × 2.0–2.4 μm, hyaline, smooth-walled, thin-walled, ellipsoidal, unicellular, acuminate, arranged in chains not observed.
Soil.
Kaiyang County, Guizhou Province, China.
China • Guizhou Province, Guiyang, Kaiyang County, Monkey-Ear Tiankeng (27°5'12.138"N, 107°0'48.42"E), soil, 19 July 2023, Wanhao Chen, TK042 (living culture).
Purpureocillium zongqii was easily identified as Purpureocillium, based on the BLASTn result in NCBI. Phylogenetic analyses show that P. zongqii has a close relationship to P. lilacinum (Fig.
1 | Parasitic on fungi | 2 |
– | Parasitic on insects | 3 |
2 | Phialides 14.8–64.9 × 1.9–3.1 μm, conidia globose to ellipsoid | Perennicordyceps lutea |
– | Phialides 12–16 × 0.6–1.5 μm, conidia fusiform to ellipsoid to inequilateral shaped | Perennicordyceps elaphomyceticola |
3 | Typical host larva of cicada or moth | 4 |
– | Typical host larva of beetle | 5 |
4 | Typical host larva of cicada, conidia globose, fusiform 1.5–3.5 (2.5) × 1.1–1.8 (1.4) μm | Perennicordyceps prolifica |
– | Typical host larva of moth, conidia ellipsoidal to cylindrical, 3.4–4.8 × 2.5–2.7 μm | Perennicordyceps zongqii |
5 | Conidiophores quasi-verticillate branching | 6 |
– | Conidiophores irregular branching | Perennicordyceps cuboidea |
6 | Conidia ellipsoid, 2.5–3.9 (3.1) × 1.0–1.4 (1.2) μm, mainly Acremonium-like phialide | Perennicordyceps ryogamiensis |
– | Conidia aubglobose, fusiform, 1.3–1.9 (1.8) × 1.0–1.9 (1.4) μm, mainly Hirsutella-like phialide | Perennicordyceps paracuboidea |
1 | Species that grow on spiders and insect forming synnemata of colours purple to lilac | 2 |
– | Species isolated, clinical specimens on human, animals, soil and crystals salt | 3 |
2 | Synnemata lilac coloured, conidia ellipsoid to cylindrical 4.8–5.6 × 1.6–2.4 μm; parasite trapdoor spiders; sexual state Cordyceps cylindrica | Purpureocillium atypicola |
– | Synnemata lilac coloured, conidia ellipsoid 2.5–4 × 1.4–1.8 μm; parasite on cadavers of cicada adults; sexual state in Cordyceps ryogamimontana | Purpureocillium takamizusanense |
3 | Acremonium-like synanamorph absent | 4 |
– | Acremonium-like synanamorph present | 5 |
4 | Phialides 8–10 (14) × 2–3 μm, conidia globose, 2–2.5 μm | Purpureocillium roseum |
– | Phialides 6.8–11.7 × 2.6–4.0 μm, conidia ellipsoidal, 2.7–4.2 × 2.0–2.4 μm | Purpureocillium zongqii |
5 | Conidia subglobose with apiculate base or limoniform | 6 |
– | Conidia ellipsoidal to fusiform | Purpureocillium lilacinum |
6 | Conidia 2–3 × 2–2.5 μm | Purpureocillium lavendulum |
– | Conidia 3.5–5.5 × 3–4.5 μm | Purpureocillium sodanum |
The genus Perennicordyceps was proposed to accommodate four species of Polycephalomyces, Polycephalomyces prolificus (Kobayasi) Kepler & Spatafora, P. cuboideus (Kobayasi & Shimizu) Kepler & Spatafora, P. paracuboideus (S. Ban, Sakane & Nakagiri) Kepler & Spatafora and P. ryogamiensis (Kobayasi & Shimizu) Kepler & Spatafora (
The genus Purpureocillium was established to accommodate Paecilomyces lilacinus Thom (
The karst region in southwestern China is one of the 36 biodiversity hotspots in the world, nurturing a large number of endemic species (
The authors have declared that no competing interests exist.
No ethical statement was reported.
This work was funded by National Natural Science Foundation of China (31860002, 81960692), High-level Innovative Talents Training Object in Guizhou Province (Qiankehepingtairencai [2020]6005), Construction Program of Key Laboratory of Guizhou Province (Qiankehepingtairencai-ZDSYS[2023]004), Research Center Project of Guizhou University of Traditional Chinese Medicine (Guizhongyi ZX hezi [2024]021).
Data curation: WHC. Formal analysis: XXR, JDL. Funding acquisition: YFH, JHZ, WHC. Methodology: YFH. Resources: WHC, DL. Writing - original draft: JDL, WHC, XXR, DL. Writing - review and editing: YFH, JHZ.
Wan-Hao Chen https://orcid.org/0000-0001-7240-6841
Jian-Dong Liang https://orcid.org/0000-0002-3939-3900
Yan-Feng Han https://orcid.org/0000-0002-8646-3975
All of the data that support the findings of this study are available in the main text or Supplementary Information.
Alignment dataset 1
Data type: fas
Alignment dataset 2
Data type: fas
Alignment dataset 3
Data type: fas
Alignment dataset 4
Data type: fas
Alignment dataset 5
Data type: nxs