Research Article |
Corresponding author: Hai-Sheng Yuan ( hsyuan@iae.ac.cn ) Academic editor: Danushka Sandaruwan Tennakoon
© 2024 Lin-Jiang Zhou, Xue-Long Li, Hai-Sheng Yuan.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Zhou L-J, Li X-L, Yuan H-S (2024) Three new wood-inhabiting fungi of Botryobasidium (Cantharellales, Basidiomycota) from subtropical forests of Southwestern China. MycoKeys 109: 337-354. https://doi.org/10.3897/mycokeys.109.133325
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The basidiomycete genus Botryobasidium is a resupinate saprotrophic with a global distribution range from coniferous to broad-leaved forest ecosystems. Though numerous species have been reported from Eurasia and North America, few have been described from China. In the current work, phylogenetic analyses of Botryobasidium in China were conducted based on the dataset of the internal transcribed spacer (ITS) regions and the large subunit (LSU) of nuclear ribosomal RNA gene. Maximum likelihood and Bayesian analyses were used to reconstruct the phylogenetic tree, and three new species, namely Botryobasidium acanthosporum, B. leptocystidiatum and B. subovalibasidium, were described from subtropical forests of Yunnan Province, Southwestern China. Botryobasidium acanthosporum is characterized by having yellowish white to dark yellow basidiome, clavate to tubular cystidia, and subglobose to globose basidiospores with obtuse spines. Botryobasidium leptocystidiatum is characterized by having fluffy to arachnoid, greyish white to ivory basidiome, generative hyphae with clamped, tubular cystidia, and subnavicular to navicular basidiospores. While, B. subovalibasidium is characterized by having yellowish to ivory basidiome, subovoid basidia, navicular to suburniform basidiospores, and thick-walled chlamydospores. These three new species are described and illustrated, and the discriminating characters between the new species and their closely related species are discussed. A key to known species of Botryobasidium in China is provided.
Botryobasidiaceae, corticioid fungi, subtropical forests, taxonomy, wood-decaying fungi
Botryobasidium Donk belongs to the order Cantharellales of phylum Basidiomycota, and was typified by B. subcoronatum (Höhn. & Litsch.) Donk (
The species of Botryobasidium are a group of saprotrophic fungi that cause a white rot in fallen angiosperm and gymnosperm woods, which play a key role in carbon recycling and energy flow in different forest ecosystems (
Up to now, the genus of about 84 species have been accepted globally in Index Fungorum and MycoBank (
During the surveys of lignicolous fungi in Yunnan Province, Southwestern China, several Botryobasidium specimens were collected from the mixed forests. The subsequent research by morphology and molecular phylogeny indicates that these specimens represent several undescribed species. The phylogenetic positions and the relationships of these species among Botryobasidium were clarified based on ITS + LSU dataset, and descriptions of these species with line drawings were provided in this study.
The voucher specimens are deposited in the herbarium of the Institute of Applied Ecology, Chinese Academy of Sciences (IFP). Macromorphological characteristics were examined using a Nikon SMZ 645 (Tokyo, Japan) stereo microscope and the color descriptions refer to
According to the manufacturer’s instructions, the Fungal Fast Non-Toxic DNA Extraction Kit (Demeter Biotech Co., Ltd, Beijing, China) was employed to extract the sample’s total DNA and amplified by the polymerase chain reaction (PCR). The internal transcribed spacer (ITS) regions were amplified with the primers ITS1 and ITS4 (
DNA sequencing was conducted at the Beijing Genomics Institute (BGI), and the sequences were assembled using Geneious v.9.0.2 (
Species and GenBank numbers used in phylogenetic analysis in this study.
Species name | ITS | LSU | Specimen No. | Substrate | Country | References |
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Botryobasidium acanthosporum L.J. Zhou & H.S. Yuan | PP229497 | / | Yuan16326 | on fallen angiosperm branch | China | Present study |
B. acanthosporum | PP229511 | / | Yuan17989 | on bark of angiosperm | China | Present study |
B. acanthosporum | PP229512 | PP218361 | Yuan18083 | on fallen trunk of Abies | China | Present study |
B. acanthosporum | PP229517 | / | Yuan18128 | on fallen trunk of Abies | China | Present study |
Botryobasidium aureum Parmasto | AJ389783 | / | GEL 2910 | / | Germany |
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B. botryosum (Bres.) J. Erikss. | DQ267124 | DQ089013 | AFTOL-ID 604 | / | USA | AFTOL Database |
B. candicans J. Erikss. | KP814200 | / | UC2022893 | on litter or well decayed wood in pinaceous forest | USA |
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B. cf. subcoronatum | KP814216 | / | UC2022856 | on litter or well decayed wood in pinaceous forest | USA |
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B. cf. subcoronatum | KP814322 | / | UC2022917 | on litter or well decayed wood in pinaceous forest | USA |
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B. coniferarum S.L. Liu & L.W. Zhou | PP209210 | PP218367 | Yuan18440 | on fallen gymnosperm trunk | China | Present study |
B. coniferarum | OR557262 | OR527286 | LWZ20171016-15 | on fallen branch of Pinus | China |
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B. coniferarum | OR557259 | OR527282 | LWZ20210928-3 | on fallen branch of Pinus | China |
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B. conspersum J. Erikss. | DQ911612 | DQ521414 | PBM 2747 (CUW) | / | USA | AFTOL Database |
B. conspersum | OP163274 | / | FLAS-F-69114 | / | USA | NCBI Database |
B. conspersum | / | AY586657 | GB/KHL11063 | / | Sweden |
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B. curtisii (Berk.) Hol.-Jech. | EU118629 | EU118629 | KHL 12950GB | / | Costa Rica |
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B. gossypirubiginosum Q. Zhou & C.L. Zhao | OR668924 | OR708665 | CLZhao 26052 | on fallen angiosperm branch | China |
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B. incanum Q. Zhou & C.L. Zhao | OR668923 | OR708664 | CLZhao 26697 | on fallen angiosperm branch | China |
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B. incanum | PP209201 | PP218357 | Yuan17803 | on fallen angiosperm branch | China | Present study |
B. indicum (P.N. Singh & S.K. Singh) R. Kirschner & G. Langer | PP209209 | PP218363 | Yuan18250 | on root of Quercus | China | Present study |
B. indicum | ON406471 | / | CLZhao 21791 | / | China | NCBI Database |
B. indicum | NR171230 | NG070816 | AMH:10054 | dead bark of Leucaena leucocephala | India |
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B. indicum | MK391496 | MK391493 | AMH:10054 | dead bark of Leucaena leucocephala | India |
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B. intertextum (Schwein.) Jülich & Stalpers | KP814540 | / | UC2022959 | on litter or well decayed wood in pinaceous forest | USA |
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B. intertextum | AJ389782 | / | DAOM 197881 | / | Canada |
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B. isabellinum (Fr.) D.P. Rogers | MZ159478 | / | K(M):181602 | / | UK | NCBI Database |
B. leptocystidiatum L.J. Zhou & H.S. Yuan | PP209211 | PP218178 | Yuan17548 | on fallen branch of Pinus | China | Present study |
B. leptocystidiatum | PP204173 | PP218180 | Yuan17557 | on dead tree of Pinus | China | Present study |
B. leptocystidiatum | PP209200 | PP218353 | Yuan17706 | on fallen angiosperm trunk | China | Present study |
B. leptocystidiatum | PP209197 | PP218354 | Yuan17708 | on bark of living angiosperm tree | China | Present study |
B. leptocystidiatum | PP209198 | PP218355 | Yuan17709 | on fallen angiosperm trunk | China | Present study |
B. robustius Pouzar & Hol.-Jech. | MH859491 | MH871272 | CBS:945.69 | / | Czech |
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B. robustius | PP436446 | / | HAY-F-004374 | / | USA | NCBI Database |
B. subcoronatum (Höhn. & Litsch.) Donk | EU118607 | EU118607 | KHL s.n. (GB) | / | Sweden |
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B. subcoronatum | MH211720 | FLAS-F-61064 | / | USA | NCBI Database | |
B. subcoronatum | DQ200924 | AY647212 | AFTOL-ID 614 | / | USA |
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B. subovalibasidium. L.J. Zhou & H.S. Yuan | PP209199 | PP218152 | Yuan16439 | on fallen trunk of Hippophae rhamnoides | China | Present study |
B. subovalibasidium | PP209196 | PP218362 | Yuan18179 | on fallen trunk of Abies | China | Present study |
B. tubulicystidium G. Langer | OL436769 | / | DK14_139 | / | USA | NCBI Database |
B. vagum (Berk. & M.A. Curtis) D.P. Rogers | OR680661 | / | personal:Alden Dirks:ACD0672 | / | USA |
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B. vagum | OR471092 | / | TENN:075258 | on Pinus | USA |
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B. yunnanense Q. Zhou & C.L. Zhao | OR668925 | OR708666 | CLZhao 24877 | on fallen angiosperm branch | China |
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Suillosporium cystidiatum (D.P. Rogers) Pouzar | MN937573 | MN937573 | VS3830 | On Picea jezoensis var. jezoensis | Russia | NCBI Database |
Suillosporium cystidiatum (D.P. Rogers) Pouzar (Botryobasidiaceae) was chosen as the outgroup according to the result of sequence BLAST in NCBI database, ensuring that it has suitable phylogenetic distances from other species in Botryobasidium. The concatenated datasets of ITS and LSU sequences of the species in Botryobasidiaceae were used to infer the molecular phylogeny. The ITS and LSU sequences were aligned separately using MEGA v.7.0 (
The ITS dataset consists of 39 sequences representing 20 taxa of Botryobasidium, and a sample of Suillosporium cystidiatum as the outgroup. The ITS sequence had an aligned length of 661 base pairs (bp), of which 321 were parsimony-informative, 75 were singleton sites, 265 were constant sites. The Bayesian analysis had an average standard deviation of split frequencies = 0.004148, and a 50% majority-rule consensus phylogram was generated. The best model was GTR + F + G4 [lset nst = 6, rates = Gamma, Ngammacat = 4, prset statefreqpr = dirichlet (1, 1, 1, 1)]. The ITS + LSU dataset consists of 40 sequences representing 20 taxa of Botryobasidium, and a sample of Suillosporium cystidiatum as the outgroup. The ITS + LSU dataset had an aligned length of 1502 bp (including 663 bp of ITS and 839 bp of LSU), of which 434 were parsimony-informative, 158 were singleton sites, 910 were constant sites. The Bayesian analysis had an average standard deviation of split frequencies = 0.005929, and a 50% majority-rule consensus phylogram was generated. The best model was GTR + F + I + G4 [lset nst = 6, rates = invgamma, Ngammacat = 4, prset statefreqpr = dirichlet (1, 1, 1, 1)].
In the phylogenetic tree based on ITS dataset (Fig.
In the phylogenetic trees based on ITS + LSU dataset (Fig.
Differed from other Botryobasidium species in having arachnoid basidiome with attached granules, clavate to subcylindrical cystidia, and subglobose to globose basidiospores with blunt spines up to 4 µm long.
China • Yunnan Province, Diqing Prefecture, Pudacuo National Park, 27°53'54"N, 99°57'04"E, on fallen trunk of Abies, 14 August 2023, Yuan 18083 (IFP 19972).
acanthosporum (Lat.), referring to the spore with spines.
Basidiomes : annual, adnate and resupinate, fluffy, pellicular, arachnoid with attached granules, 50–150 μm thick, adherent to the substrate and separates easily when wet. Hymenophoral surface smooth, greyish white to yellowish white (1B2–4B2) when fresh, pale yellow to dark yellow (3A3–4C8) when dry. Sterile margin often indeterminate and not differentiated.
Hyphal structure : hyphal system monomitic; generative hyphae simple septate, thin- to slightly thick-walled; tissues unchanged in KOH.
Subiculum : subicular hyphae colorless, thick-walled, frequently branched at right angles, cyanophilous, inamyloid, loosely interwoven, 7–12 μm in diam. Subhymenial hyphae colorless, thin-walled, acyanophilous, inamyloid, 7–11 μm in diam.
Cystidia : clavate to tubular, infrequent, smooth, thin-walled, colorless, simple septate, apically obtuse, acyanophilous, inamyloid, unchanged in KOH and distilled water, 26–37(–64) × 7–10 μm.
Basidia : clavate to subcylindrical, smooth, thin-walled, with 2 sterigmata, simple septate, acyanophilous, inamyloid, unchanged in KOH and distilled water, 14.5–20 × 8–10 μm.
Basidiospores : subglobose to globose, aculeate, slightly thick- to thick-walled, colorless, cyanophilous, inamyloid, unchanged in KOH and distilled water, 8–10(–10.3) × 8–10 μm (exclude spines), L = 9.25 μm, W = 8.92 μm, Q = 1.0–1.13 (n = 60/2); spines with apically obtuse, usually isolated, sometimes grouped in 2, up to 4 µm long.
Chlamydospores absent and anamorph not seen.
Growing in mixed forests dominated by Abies and a small number of Picea, Quercus, and other angiosperm trees. So far, known from Yunnan Province and Xizang Autonomous Region, China.
China • Xizang Autonomous Region, Bomi County, Yigong Tea Farm, 30°07'55"N, 95°01'05"E, on fallen angiosperm branch, 24 October 2021, Yuan 16326 (IFP 19970; paratype) • Yunnan Province, Diqing Prefecture, Baimaxueshan National Nature Reserve, 28°18'19"N, 99°08'57"E, on bark of angiosperm, 13 August 2023, Yuan 17989 (IFP 19971) • Pudacuo National Park, 27°53'56"N, 99°57'16"E, on fallen trunk of Abies, 14 August 2023, Yuan 18128 (holotype IFP 19973).
Differed from other Botryobasidium species in having tubular cystidia and clamped in all hyphae.
China • Yunnan Province, Lincang City, Wulaoshan National Forest Park, 23°54'47"N, 100°10'53"E, on bark of living angiosperm tree, 9 August 2023, Yuan 17708 (holotype IFP 019955).
leptocystidiatum (Lat.), referring to the leptocystidia.
Basidiomes : annual, resupinate, effuse, pellicular, fluffy to arachnoid, 100–150 μm thick, adherent to the substrate and not easily separated. Hymenophoral surface smooth, greyish white (1B1–30B1) to smoky grey (3C2) when fresh, greyish white (1B1–30B1) to ivory (4B3) when dry; margin often indeterminate and not differentiated.
Hyphal structure : hyphal system monomitic; generative hyphae clamped, thin- to slightly thick-walled; tissues unchanged in KOH.
Subiculum : subicular hyphae colorless, slightly thick-walled, sparsely branched at right angles, cyanophilous, inamyloid, loosely interwoven, 7–10 μm in diam. Subhymenial hyphae colorless, thin-walled, frequently branched at right angles, acyanophilous, inamyloid, loosely interwoven, 4–7 μm in diam.
Cystidia : tubular, infrequent, smooth, thin-walled, colorless, apically obtuse, basal clamped, without additional septate, acyanophilous, inamyloid, unchanged in KOH and distilled water, 21.5–77 × 4–7.5 μm.
Basidia : ordered by botryose cluster, subcylindrical, smooth, thin-walled, usually with 6 sterigmata, occasionally with 7 sterigmata, basal clamped, acyanophilous, inamyloid, unchanged in KOH and distilled water, 10.5–15 × 7–8 μm.
Basidiospores : subnavicular to navicular, smooth, thin-walled, colorless, occasionally a few stuck together, acyanophilous, inamyloid, unchanged in KOH and distilled water, (6–)6.5–7.8(–8.1) × (2.8–)2.9–3.7(–3.9) μm, L = 7.2 μm, W = 3.1 μm, Q = 1.92–2.5 (n = 120/3).
Chlamydospores absent and anamorph not seen.
Growing in mixed forests dominated by Pinus and a small number of Fagaceae trees. So far only known from Yunnan Province, China.
China • Yunnan Province, Lincang City, Wulaoshan National Forest Park, 23°54'47"N, 100°10'53"E, on fallen branch of Pinus, 8 August 2023, Yuan 17548 (IFP 019952; paratype) • on dead tree of Pinus, 8 August 2023, Yuan 17557 (IFP 019953) • on fallen angiosperm trunk, 9 August 2023, Yuan 17706 (IFP 019954), Yuan 17709 (IFP 019956).
Differed from other Botryobasidium species in having effuse, yellowish to ivory basidiomes, subovoid to ovoid basidia, ellipsoid chlamydospores.
China • Yunnan Province, Diqing Prefecture, Pudacuo National Park, 27°83'67"N, 99°95'76"E, Alt. 3655 m, on fallen trunk of Abies, 15 August 2023, Yuan 18179 (holotype IFP 019957).
subovalibasidium (Lat.), referring to the subovoid basidia.
Basidiomes : annual, resupinate, effuse, fluffy, 100–200 µm thick, adherent to the substrate and not easily separated. Hymenophoral surface smooth, greyish white (1B1–30B1) to ivory (4B3) when fresh, pale yellow (4A3) to greyish yellow (4B5) when dry; margin not differentiated, distinct.
Hyphal structure : hyphal system monomitic; generative hyphae simple septate, thin- to slightly thick-walled; tissues unchanged in KOH.
Subiculum : subicular hyphae colorless, slightly thick-walled, frequently branched, cyanophilous, inamyloid, loosely interwoven, (7–)8–11.5 μm in diam. Subhymenial hyphae colorless, thin-walled, moderately branched, acyanophilous, inamyloid, loosely interwoven, 5–8.5 μm in diam.
Cystidia : absent.
Basidia : subovoid to ovoid, smooth, thin-walled, with 4–6 sterigmata, basal simple septate, acyanophilous, inamyloid, unchanged in KOH and distilled water, (12–)14–18 × 9–10 µm.
Basidiospores : navicular to suburniform, smooth, thin-walled, colorless, occasionally stuck together, acyanophilous, inamyloid, unchanged in KOH and distilled water, (5.7–)7–9.8(–10) × (3.2–)3.7–5(–5.1) µm, L = 8.3 µm, W = 4.2 µm, Q = 1.53–2.5 (n = 60/1).
Chlamydospores : orange-yellow, ellipsoid, smooth, thick-walled, cyanophilous, inamyloid, unchanged in KOH, unchanged in distilled water, 17–21(–22) × (9–)10–11 µm, L = 18.5 µm, W = 10.3 µm, Q = 1.50–2.1 (n = 60/2).
Growing in mixed forests dominated by Abies and a small number of Picea, Quercus, and other angiosperm trees. So far, known from Yunnan Province and Xizang Autonomous Region, China.
China • Xizang Autonomous Region, Bomi County, on fallen trunk of Hippophae rhamnoides, 26 October 2021, Yuan 16439 (IFP 019951; paratype).
In this study, three new species of Botryobasidium collected from Southwestern China are described based on morphological characteristics and phylogenetic analyses combining ITS and LSU sequences. The molecular phylogenetic analyses showed moderate to high support in the deeper nodes and at the species level which is consistent with the previous study (
The phylogenetic trees show that B. acanthosporum is closely linked to B. incanum, B. isabellinum and B. vagum (Figs
In the phylogenetic trees (Figs
Botryobasidium subovalibasidium has an adjacent phylogenetic relationship with B. aureum, B. botryosum and B. candicans in the phylogenetic trees (Figs
1 | Basidiospores with spines | 2 |
– | Basidiospores smooth | 4 |
2 | Basidiospores ellipsoid, 7–9 × 5–6.3 µm | B. bondarcevii |
– | Basidiospores globose | 3 |
3 | Basidiospores 7–10 µm, spines up to 1–3 µm, basidia with 4 sterigmata | B. isabellinum |
– | Basidiospores 8–10 µm, spines up to 4 µm, basidia with 2 sterigmata | B. acanthosporum |
4 | Conidia absent | 5 |
– | Conidia present | 15 |
5 | Hyphae with clamps at least in a part of basidiome | 6 |
– | Hyphae without clamps | 9 |
6 | Clamps present on all septa | 7 |
– | Both clamps and simple septa present | 8 |
7 | Basidiospores navicular, 6–7 × 2.5–3 µm; cystidia absent | B. subcoronatum |
– | Basidiospores subnavicular to navicular, 6.5–7.8 × 2.9–3.7 µm; cystidia present | B. leptocystidiatum |
8 | Clamps often present in subiculum and subhymenium | B. angustisporum |
– | Clamps often absent in subiculum | B. intertextum |
9 | Basidiospores navicular | 10 |
– | Basidiospores not navicular | 12 |
10 | Basidiospores 7–8 × 3–3.5 µm | B. coniferarum |
– | Basidiospores more than 8 µm long | 11 |
11 | Basidiospores 9–10 × 3.5–5 µm; basidia cylindrical, 9–16 × 7–9 µm | B. subbotryosum |
– | Basidiospores 8–12 × 4.5–6 µm; basidia clavate to subcylindrical, 20–25 × 8–12 µm | B. vagum |
12 | Basidiospores obliquely ovoid, apically obtuse | 13 |
– | Basidiospores not ovoid | 14 |
13 | Basidiospores 7.5–12 × 3.5–5 µm | B. obtusisporum |
– | Basidiospores 5–8 × 2.5–3.5 µm | B. pruinatum |
14 | Basidiospores subglobose, 14–17.5 × 13–15.5 µm | B. gossypirubiginosum |
– | Basidiospores ellipsoid, 6.5–8.5 × 3.5–5 µm | B. incanum |
15 | Conidia ellipsoid | 16 |
– | Conidia not ellipsoid | 17 |
16 | Conidia 13–22 × 9–12 µm; basidia ellipsoid to obovate, 12–15 × 6–8 µm | B. conspersum |
– | Conidia 17–21 × 10–11 µm; basidia subovoid to ovoid, 14–18 × 9–10 µm | B. subovalibasidium |
17 | Conidia subglobose to citriform, 15–20 × 8–10 µm | B. candicans |
– | Conidia subglobose to globose, 11.5–14.5 × 9.5–10.5 µm | B. yunnanense |
The authors have declared that no competing interests exist.
No ethical statement was reported.
This research was supported by the National Natural Science Foundation of China (Project Nos. U2102220 & 31970017) and the CAS Key Laboratory Annual Project.
Investigation and writing draft: LJZ. Data measurement and analysis: XLL. Conceptualization and supervision: HSY. All authors contributed to the article and approved the submitted version.
Lin-Jiang Zhou https://orcid.org/0000-0003-2665-6959
Xue-Long Li https://orcid.org/0009-0006-3948-0234
Hai-Sheng Yuan https://orcid.org/0000-0001-7056-140X
All of the data that support the findings of this study are available in the main text.