Research Article |
Corresponding author: Marcin Piątek ( m.piatek@botany.pl ) Academic editor: Pedro Crous
© 2024 Marcin Piątek, Monika Stryjak-Bogacka, Paweł Czachura.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Piątek M, Stryjak-Bogacka M, Czachura P (2024) Arthrocatenales, a new order of extremophilic fungi in the Dothideomycetes. MycoKeys 108: 47-74. https://doi.org/10.3897/mycokeys.108.128033
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The widely treated order Capnodiales is one of the most important orders in the class Dothideomycetes. Recently, the order Capnodiales s. lat. was reassessed and split into seven orders (Capnodiales s. str., Cladosporiales, Comminutisporales, Mycosphaerellales, Neophaeothecales, Phaeothecales and Racodiales) based on multi-locus phylogeny, morphology and life strategies. In this study, two Arthrocatena strains isolated from sooty mould communities on the leaves of Tilia cordata and needles of Pinus nigra in southern Poland were analyzed. Multi-locus phylogenetic analyses (ITS-LSU-SSU-rpb2-tef1) along with morphological examination showed that they belong to Capnobotryella antalyensis, which represents a sister taxon to Arthrocatena tenebrosa. Capnobotryella antalyensis is a rock-inhabiting fungus described from Turkey. The following new combination is proposed: Arthrocatena antalyensis. Phylogenetic analyses also showed that Arthrocatena and related genus Hyphoconis, both known previously only from rocks, form a sister lineage to orders Cladosporiales and Comminutisporales. The new order Arthrocatenales and new family Arthrocatenaceae are proposed to this clade. Representatives of this order are extremophilic fungi that live on rocks and in sooty mould communities.
Dothideomycetes, molecular phylogeny, new combination, new family, new order, taxonomy
The order Capnodiales in the wide sense (s. lat.) is one of the most important orders in the class Dothideomycetes. It contains thousands of species growing in all areas of the world, the majority of known environments, including most extreme ones, and showing diverse nutritional modes and life strategies (
Sooty moulds are epiphytes associated with honeydew or sweet plant exudates occurring on the leaves/needles of woody plants (
Fungi isolated from sooty mould communities are sometimes phylogenetically related to rock-inhabiting fungi. Such a relationship was mentioned in the orders Capnodiales (s. lat.) and Chaetothyriales (
In a recent survey of sooty mould communities occurring on ornamental woody plants in urban environments in southern Poland we isolated two strains that were assigned to the genus Arthrocatena based on initial ITS rDNA sequencing. This study aims to identify isolated Arthrocatena strains using morphology and multi-locus phylogenetic analyses and to clarify the phylogenetic placement of the genera Arthrocatena and Hyphoconis within Capnodiales s. lat.
Fungal isolates studied here were obtained from sooty mould communities on ornamental woody plants cultivated in municipal greenery in cities of southern Poland. The initial isolations were made on malt extract agar (MEA – Blakeslee’s formula), potato dextrose agar (PDA), and rose bengal agar (RBC). The details of microbiological media and method of initial isolation are described in
Macroscopic characteristics were documented using 4-week-old colonies growing on MEA and PDA incubated at 25 °C. Microscopic characteristics were examined under a Nikon Eclipse 80i light microscope using slide cultures on PDA incubated at 25 °C, after approximately one month growth (
DNA was extracted using DNeasy® Plant Mini Kit (Qiagen, Germany), according to the manufacturer’s protocol. Four loci were amplified: ITS1‐5.8S‐ITS2 rDNA (= ITS), fragment of the large subunit rDNA (28S D1–D2 = LSU), the small subunit rDNA (18S = SSU) and protein-coding gene – partial DNA-directed RNA polymerase II second largest subunit (rpb2). The following primer pairs were used for amplification: ITS1–ITS4 for ITS (
The affinity of the isolated strains was first checked in the NCBIs GenBank nucleotide database using the megablast search tool (
List of species, with country of origin, host/substrate, strain, GenBank accession numbers and references, used in phylogenetic analyses.
Species | Country | Host/substrate | Strain | GenBank acc. no. | References | ||||
---|---|---|---|---|---|---|---|---|---|
ITS | LSU | SSU | rpb2 | tef1 | |||||
Aeminium ludgeri | Portugal | limestone | E14 | MG938062 | MG938288 | – | – | – |
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Aeminium ludgeri | Portugal | limestone | E8 | MG938056 | MG938284 | – | – | – |
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Aeminium ludgeri | Portugal | limestone | E12 | MG938054 | MG938286 | – | – | – |
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Amycosphaerella africana | South Africa | leaves of Eucalyptus viminalis | CBS 680.95 | MH862549 | KF902048 | – | – | – |
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Amycosphaerella keniensis | Kenya | leaf litter of Eucalyptus grandis | CBS 111001 | MF951290 | GQ852610 | NG_062384 | MF951433 | – |
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Arthrocatena antalyensis (syn. Capnobotryella antalyensis) | Poland | sooty mould community on Tilia cordata | CBS 150720 | OR096278 | OR096282 | OR096280 | OR096699 | – | this study |
Arthrocatena antalyensis (syn. Capnobotryella antalyensis) | Poland | sooty mould community on Pinus nigra | CBS 150721 | OR096279 | OR096283 | OR096281 | OR096700 | – | this study |
Arthrocatena antalyensis (syn. Capnobotryella antalyensis) | Turkey | marble | MA 4659 | AJ972854 | – | AJ972854 | – | – |
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Arthrocatena antalyensis (syn. Capnobotryella antalyensis) | Turkey | marble | MA 4775 | AJ972860 | – | AJ972860 | – | – |
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Arthrocatena tenebrosa | Italy | rock | CCFEE 5413 | NR_144971 | NG_056969 | NG_061095 | – | – |
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Aureobasidium pullulans | France | Vitis vinifera | AFTOL-ID 912 | – | DQ470956 | DQ471004 | DQ470906 | DQ471075 |
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Austroafricana associata | Australia | Protea lepidocarpodendron | CBS 112224 | DQ302968 | KF901827 | GU296200 | – | GU349025 |
|
Batcheloromyces sedgefieldii | South Africa | Protea repens | CBS 112119 | NR_137012 | KF937222 | – | – | – |
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Capnobotryella renispora | Japan | Capnobotrys neesii | CBS 214.90 | NR_121295 | NG_058782 | NG_070856 | – | – |
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Capnodium alfenasii | Brazil | Tabebuia sp. | CBS 146151 | MN749233 | MN749165 | – | MN829260 | MN829346 |
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Capnodium blackwelliae | USA | Myrtus communis | CBS 133588 | MN749235 | MH878118 | – | GU371743 | GU349054 |
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Capnodium coartatum | Thailand | Psidium sp. | MFLUCC 10-0069 | – | JN832614 | JN832599 | – | – |
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Capnodium coffeae | Zaire | Coffea robusta | CBS 147.52 | MH856967 | GU214400 | DQ247808 | KT216519 | DQ471089 |
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Capnodium coffeicola | Thailand | Coffea sp. | MFLUCC 15-0206 | – | KU358920 | – | – | – |
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Capnodium gamsii | Sri Lanka | unknown leaf | CBS 892.73 | MN749237 | GU301847 | – | GU371736 | GU349045 |
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Capnodium neocoffeicola | Thailand | Coffea arabica | CBS 139614 | MN749242 | MN749172 | – | MN829267 | MN829353 |
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Capnodium paracoffeicola | Thailand | Coffea arabica | CBS 139616 | MN749244 | MN749174 | – | MN829269 | MN829355 |
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“Capnodium” salicinum | Indonesia | Bursaria spinosa | CBS 131.34 | MH855469 | EU019269 | DQ677997 | KT216553 | DQ677889 |
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Cercospora beticola | Italy | Beta vulgaris | CBS 116456 | NR_121315 | DQ678091 | NG_062715 | KT216555 | DQ677932 |
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Cercosporella virgaureae | South Korea | Erigeron annuus | CBS 113304 | GU214658 | KF251805 | GU214658 | KX348051 | – |
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Chaetocapnodium indonesiacum | Indonesia | Camellia sinensis | CBS 202.30 | MH855113 | GU301849 | GU296178 | MN829273 | GU349060 |
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Chaetocapnodium insulare | South Africa | Phylica arborea | CBS 146159 | NR_168830 | MN749178 | – | MN829274 | MN829359 |
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Chaetocapnodium philippinense | Philippines | palm | MFLUCC 12-0110 | NR_168831 | KP744503 | – | MN829277 | MN829362 |
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Chaetocapnodium placitae | Australia | Eucalyptus placita | CBS 124758 | GQ303268 | GQ303299 | – | MN829278 | MN829363 |
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Chaetocapnodium siamensis | Thailand | leaves of unidentified plant | MFLUCC 13-0778 | – | KP744479 | – | – | – |
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Chaetocapnodium summerellii | Australia | Eucalyptus placita | CBS 146157 | NR_168829 | MN749176 | – | MN829271 | MN829357 |
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Chaetocapnodium tanzanicum | Tanzania | lichen | CBS 145.79 | NR_168832 | MN749182 | – | MN829280 | MN829365 |
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Chaetocapnodium thailandense | Thailand | – | CBS 139619 | NR_168833 | MN749183 | – | MN829281 | MN829366 |
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Chaetothyrina guttulata | Thailand | Mangifera indica | MFLUCC 15-1080 | KX372277 | KU358917 | KU358916 | – | – |
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Chaetothyrina musarum | Thailand | Musa sp. | MFLUCC 15-0383 | KX372275 | KU710171 | KU710174 | – | – |
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Cladosporium allicinum | Czech Republic | Polygonatum odoratum | CBS 813.71 | – | DQ008149 | – | – | – |
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Cladosporium iridis | Netherlands | Iris sp. | CBS 138.40 | EU167591 | DQ008148 | EU167591 | KT223022 | – |
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Cladosporium ramotenellum | United Kingdom | leaves of Arundo sp. | CBS 170.54 | MH857281 | DQ678057 | DQ678004 | DQ677952 | DQ677898 |
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Comminutispora agavacearum | USA | Dasylirion leiophyllum | CBS 619.95 | MH862543 | EU981286 | – | MN829337 | MN829423 |
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Conidiocarpus asiaticus | Thailand | Coffea arabica | MFLUCC 10-0062 | KU358924 | JN832612 | JN832597 | – | – |
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Conidiocarpus caucasicus | Iran | Citrus sinensis | GUMH 937 | – | KC833050 | KC833051 | – | – |
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Conidiocarpus siamensis | Thailand | Mangifera indica | MFLUCC 10-0064 | – | JN832609 | JN832594 | – | – |
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Cystocoleus ebeneus | Austria | – | L161 | – | EU048578 | EU048571 | – | – |
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Cystocoleus ebeneus | Austria | – | L348 | – | EU048580 | – | – | – |
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Davidiellomyces australiensis | Australia | leaves of Cyperaceae | CPC 29170 | KY979737 | KY979792 | – | LT799790 | – |
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Dissoconium aciculare | Germany | Astragalus sp. | CBS 204.89 | AY725520 | GU214419 | GU214523 | KX288435 | – |
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Dissoconium aciculare | Netherlands | Brassica sp. | CBS 201.89 | AY725519 | GU214418 | GU214522 | KT216557 | – |
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Dissoconium aciculare | USA | Malus domestica | CBS 132080 | JQ622083 | JQ622091 | – | – | – |
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Dissoconium aciculare | USA | Malus domestica | CBS 132081 | AY598874 | JQ622097 | – | – | – |
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Dothidea insculpta | France | Clematis vitalba | CBS 189.58 | AF027764 | DQ247802 | DQ247810 | DQ247792 | DQ471081 | Jacobs & Rehner 1998; |
Dothidea sambuci | Austria | Sambucus nigra | AFTOL-ID 274 | DQ491505 | AY544681 | AY544722 | – | – |
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Dothiora cannabinae | India | Daphne cannabina | AFTOL-ID 1359 | NR_144904 | DQ470984 | DQ479933 | DQ470936 | DQ471107 |
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Dothiora phillyreae | Spain | Phillyrea angustifolia | CBS 473.69 | NR_155057 | EU754146 | EU754047 | – | – |
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Elsinoe phaseoli | Cuba | Phaseolus lunatus | AFTOL-ID 1855 | NR_148161 | DQ678095 | DQ678042 | KX887144 | DQ677935 |
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Extremus antarcticus | Antarctica | rock | CCFEE 5312 | KF309979 | KF310020 | – | – | – |
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Fumiglobus pieridicola | Canada | Pieris japonica | UBC F23788 | NR_153985 | KC833052 | NG_065012 | – | – |
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Graphiopsis chlorocephala | Germany | Paeonia delavayi | CBS 121522 | EU009457 | EU009457 | – | LT799753 | – |
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Graphiopsis chlorocephala | New Zealand | Paeonia sp. | CBS 100405 | EU009456 | EU009456 | – | KT216520 | – |
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Heteroconium citharexyli | Ecuador | Citharexylum ilicifolium | S (type) | HM628776 | HM628775 | – | – | – |
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Hortaea werneckii | Greece | sea water-sprayed marble | CBS 100496 | AY128703 | GU301817 | GU296152 | GU371739 | GU349050 |
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Houjia yanglingensis | China | Malus domestica | CBS 125225 | MH863464 | GQ433631 | – | – | – |
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Houjia yanglingensis | China | Malus domestica | CBS 125226 | GQ433629 | GQ433630 | – | – | – |
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Hyalinozasmidium aerohyalinosporum | Australia | Eucalyptus tectifica | CBS 125011 | KF901605 | KF901930 | – | MF951504 | – |
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Hyphoconis sterilis | Spain | rock | TRN287 | AY843125 | KF310032 | AY843257 | – | _ |
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Leptoxyphium cacuminum | Thailand | Gossypium herbaceum | MFLUCC 10-0059 | – | JN832603 | JN832588 | – | – |
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Leptoxyphium citri | Spain | Citrus sinensis | CBS 451.66 | MN749266 | KF902094 | – | GU371727 | GU349039 |
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Leptoxyphium glochidion | China | Glochidion wrightii | IFRDCC 2651 | NR_155316 | KF982308 | NG_065036 | – | – |
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Leptoxyphium kurandae | Australia | Eucalyptus sp. | CBS 129530 | JF951150 | JF951170 | – | MN829295 | MN829379 |
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Leptoxyphium madagascariense | Madagascar | Eucalyptus camaldulensis | CBS 124766 | GQ303277 | MH874923 | – | MN829296 | MN829380 |
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Microcyclosporella mali | Slovenia | Malus domestica | CBS 126136 | MH864045 | GU570547 | – | KX288436 | – |
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Mycosphaerelloides madeirae | Netherlands | Quercus robur | CBS 116066 | AY853188 | KX286989 | – | KX288444 | – |
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Myriangium hispanicum | – | Acer monspessulanum | CBS 247.33 | MH855426 | GU301854 | GU296180 | GU371744 | GU349055 |
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Neoantennariella phylicae | United Kingdom | Phylica arborea | CBS 146163 | NR_168834 | MN749211 | – | MN829313 | MN829397 |
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Neoasbolisia phylicae | United Kingdom | Phylica arborea | CBS 146168 | NR_168835 | MN749215 | – | MN829317 | MN829401 |
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Neocladosporium leucadendri | South Africa | Leucadendron sp. | CBS 131317 | NR_152324 | JQ044455 | – | LT799755 | – |
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Neodevriesia hilliana | New Zealand | Macrozamia communis | CBS 123187 | NR_145098 | GU214414 | – | LT799761 | – |
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Neodevriesia modesta | Italy | rock | CBS 137182 | NR_144975 | KF310026 | – | – | – |
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Neodevriesia pakbiae | Thailand | unidentified fern | CBS 139914 | NR_137997 | KR476775 | – | – | – |
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Neodevriesia stirlingiae | Australia | Stirlingia latifolia | CBS 133581 | NR_120228 | KC005799 | – | – | – |
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Neodevriesia strelitziae | South Africa | Strelitzia nicolai | CBS 122379 | NR_175123 | GU301810 | NG_078729 | GU371738 | GU349049 |
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Neodevriesia xanthorrhoeae | Australia | Xanthorrhoea australis | CBS 128219 | NR_144962 | HQ599606 | – | – | – |
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Neomycosphaerella pseudopentameridis | South Africa | Pseudopentameris macrantha | CBS 136407 | KF777173 | KF777226 | – | MF951545 | – |
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Neophaeotheca salicorniae | South Africa | Salicornia sp. | CBS 141299 | NR_145401 | KX228327 | – | MN829343 | MN829429 |
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Neophaeotheca triangularis | Belgium | wet surface of humidifier of air conditioning unit | CBS 471.90 | MH862225 | EU019279 | – | MN829344 | MN829430 |
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Neoramulariopsis catenulata | Rwanda | Phaseolus vulgaris | CBS 355.73 | NR_153920 | KX286973 | – | KX288424 | – |
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Paradevriesia compacta | Spain | rock | CBS 118294 | NR_144955 | GU323220 | NG_064945 | GU371751 | GU349088 |
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Paramycosphaerella intermedia | New Zealand | Eucalyptus saligna | CBS 114356 | NR_164413 | KF902026 | – | – | – |
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Paramycosphaerella marksii | South Africa | Eucalyptus grandis | CBS 110750 | DQ267596 | DQ204757 | – | – | – |
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Penidiella sp. | – | – | CPC 16707 | MN749304 | MN749230 | – | MN829339 | MN829425 |
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Petrophila incerta | Spain | rock | CBS 118608 | NR_144956 | KF310030 | – | – | – |
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Phaeotheca fissurella | Canada | Pinus contorta | CBS 520.89 | MH862184 | GU117900 | NG_065804 | MN829342 | MN829428 |
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Phaeothecoidiella illinoisensis | USA | Malus sp. | CBS 125223 | NR_137740 | GU117901 | – | – | – |
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Phaeothecoidiella missouriensis | USA | Malus sp. | CBS 118959 | GU117899 | GU117903 | – | – | – |
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Phaeoxyphiella australiana | Australia | Agonis sp. | CBS 146169 | NR_168837 | MN749220 | – | MN829322 | MN829406 |
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Phaeoxyphiella phylicae | United Kingdom | Phylica arborea | CBS 146170 | NR_168836 | MN749219 | – | MN829321 | MN829405 |
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Phloeospora ulmi | Austria | Ulmus glabra | CBS 344.97 | KF251202 | KF251705 | – | – | – |
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Phragmocapnias betle | Thailand | Ixora sp. | MFLUCC 10-0053 | KU358922 | JN832606 | JN832591 | – | – |
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Phragmocapnias plumeriae | Thailand | Plumeria sp. | MFLUCC 15-0205 | KU358919 | KU358918 | – | – | – |
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Polychaeton citri | Iran | Citrus aurantium | CBS 116435 | GU214649 | GU214469 | – | MN829310 | MN829394 |
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Pseudoveronaea ellipsoidea | USA | Malus domestica | CBS 132085 | NR_111367 | FJ147154 | – | KT921165 | – |
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Pseudoveronaea obclavata | USA | Malus domestica | CBS 132086 | NR_111168 | JQ622102 | – | – | – |
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Pseudozasmidium eucalypti | Australia | Eucalyptus tereticornis | CBS 121101 | KF901606 | KF901931 | – | MF951637 | – |
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Rachicladosporium americanum | USA | leaf litter | CBS 124774 | NR_175021 | GQ303323 | – | MN829336 | MN829421 |
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Rachicladosporium cboliae | USA | twig | CBS 125424 | MH863703 | GU214484 | NG_062827 | LT799763 | MN829422 |
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Rachicladosporium eucalypti | Ethiopia | Eucalyptus globulus | CBS 138900 | NR_155718 | KP004476 | – | – | – |
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Rachicladosporium pini | Netherlands | Pinus monophylla | CBS 129525 | JF951145 | JF951165 | – | LT799764 | – |
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Racodium rupestre | Austria | – | L346 | GU067666 | EU048583 | EU048575 | – | – |
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Racodium rupestre | United Kingdom | – | L423 | GU067668 | EU048581 | – | – | – |
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Racodium rupestre | Italy | – | L424 | GU067669 | EU048582 | – | – | – |
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Ramichloridium luteum | China | Malus domestica | CBS 132088 | NR_119684 | JQ622099 | – | MF951417 | – |
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Ramularia endophylla | Netherlands | Quercus robur | CBS 113265 | KF251220 | KF251723 | – | – | – |
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Ramularia nyssicola | USA | Nyssa ogeche x sylvatica | CBS 127665 | NR_111549 | NG_070531 | – | KJ504636 | – |
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Ramularia pusilla | Germany | Poa annua | CBS 124973 | NR_154917 | KP894141 | – | KP894687 | – |
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Readeriella nontingens | Australia | Eucalyptus oblonga | CPC 14444 | KF901726 | KF902073 | – | – | – |
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Readerielliopsis fuscoporiae | French Guiana | Fuscoporia wahlbergii | CBS 139900 | NR_137978 | KR476755 | – | MN829326 | MN829410 |
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Readerielliopsis guyanensis | French Guiana | decaying leaf | CBS 117550 | NR_176103 | FJ493211 | – | MN829327 | MN829411 |
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Saxophila tyrrhenica | Italy | stone monument | CCFEE 5935 | KP791764 | NG_059571 | – | – | – |
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Schismatomma decolorans | – | – | AFTOL-ID 307 | AY548808 | AY548815 | AY548809 | DQ883715 | DQ883725 |
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Schizothyrium cryptogama | USA | Malus domestica | CBS 125658 | FJ425208 | FJ147157 | – | KT216548 | – |
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Schizothyrium pomi | USA | Malus domestica | CBS 125312 | FJ425206 | FJ147155 | – | KT216539 | – |
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Schizothyrium wisconsinensis | USA | Malus domestica | CBS 125659 | FJ425209 | FJ147158 | – | KT216549 | – |
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Scolecoxyphium blechni | United Kingdom | Blechnum palmiforme | CBS 146174 | NR_168838 | MN749224 | – | MN829328 | MN829412 |
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Scolecoxyphium blechnicola | United Kingdom | Blechnum palmiforme | CBS 146175 | NR_168839 | MN749225 | – | MN829329 | MN829413 |
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Scolecoxyphium leucadendri | South Africa | Leucadendron sp. | CBS 146176 | NR_168840 | MN749226 | – | MN829330 | MN829414 |
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Scolecoxyphium phylicae | South Africa | Phylica arborea | CBS 146177 | NR_168841 | MN749227 | – | MN829331 | MN829415 |
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Scorias aphidis | – | aphid | CBS 325.33 | GU214696 | MH866910 | – | KT216542 | MN829417 |
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Scorias camelliae | Indomesia | Camellia sinensis | CBS 201.30 | MH855112 | MH866560 | – | MN829333 | MN829418 |
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Scorias leucadendri | South africa | Leucadendron muirii | CBS 131318 | JQ044437 | JQ044456 | – | MN829334 | MN829419 |
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Scorias mangiferae | Thailand | Mangifera indica | MFLUCC 15-0230 | NR_154422 | KT588603 | – | – | – |
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Scorias spongiosa | Thailand | Entada sp. | MFLUCC 10-0084 | – | JN832601 | JN832586 | – | – |
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Septoria lycopersici | South Korea | Lycopersicon esculentum | CBS 128654 | MH865102 | KF251966 | – | KX348091 | – |
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Septoria protearum | South Africa | Zantedeschia aethiopica | CBS 135477 | KF251524 | KF252029 | – | – | – |
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Sporidesmajora pennsylvaniensis | USA | Malus domestica | CBS 125229 | NR_156639 | MF951122 | – | MF951424 | – |
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Stomiopeltis versicolor | USA | Malus domestica | GA3-23C2b | FJ438375 | FJ147163 | – | – | – |
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Teratosphaeria stellenboschiana | South Africa | Eucalyptus punctata | CBS 125215 | KF901733 | KF937247 | – | – | – |
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Teratosphaeriaceae sp. | – | – | CPC 16695 | MN749303 | MN749231 | – | MN829340 | MN829426 |
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Teratosphaeriaceae sp. | – | – | CPC 17588 | MN749305 | MN749232 | – | MN829341 | MN829427 |
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Uwebraunia commune | South Africa | Eucalyptus nitens | CBS 110747 | AY725535 | GU214420 | GU214525 | KT216558 | – |
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Verrucocladosporium dirinae | United Kingdom | Dirina massiliensis | CBS 112794 | EU040244 | EU040244 | – | – | – |
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Xenodevriesia strelitziicola | South Africa | Strelitzia sp. | CBS 122480 | NR_171741 | NG_059085 | – | – | – |
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Xenomycosphaerella elongata | Venezuela | Eucalyptus camaldulensis x urophylla | CBS 120735 | NR_154469 | JF700942 | – | MF951687 | – |
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Zasmidium pseudotsugae | USA | Pseudotsuga menziesii | rapssd | EF114687 | EF114704 | EF114729 | – | – |
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Zasmidium tsugae | USA | Tsuga heterophylla | ratstk | EF114688 | EF114705 | EF114730 | – | – |
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For phylogenetic analyses, sequences were separately aligned for each single-gene dataset using MAFFT algorithm (
The concatenated ITS-LSU-SSU-rpb2-tef1 alignment contained sequences belonging to 130 species, including Schismatomma decolorans used as an outgroup. The alignment comprised a total of 4829 characters (ITS: 829, LSU: 819, SSU: 946, rpb2: 1122, tef1: 1113), including alignment gaps. The best matching substitution models selected for single locus alignments in the ML analysis were as follows: GTR+I+G4 for ITS, TIM3+I+G4 for LSU, K80+I+G4 for SSU, TIM2+I+G4 and TPM3uf+I+G4 for rpb2 (three codons), and JC+I+G4, HKY+I+G4 and TIM3+I+G4 for tef1 (three codons). The BI analysis was performed with the following substitution models: GTR+I+G4 for ITS and LSU, K80+I+G4 for SSU, GTR+I+G4 and HKY+I+G4 for rpb2 codons, and JC+I+G4, HKY+I+G4 and HKY+G4 for tef1 codons. ML and BI analyses resulted in similar tree topologies (Suppl. materials
Reduced phylogenetic tree of selected members of the Capnodiales s. lat., Dothideales and Myriangiales, including all described species of the genera Arthrocatena and Hyphoconis, obtained from a maximum likelihood analysis of the combined multi-locus alignment (ITS, LSU, SSU, rpb2, tef1). The positions of new strains, Arthrocatena antalyensis comb. nov. and new order Arthrocatenales are indicated in bold. Ex-type cultures are indicated with superscript T. Numbers above branches indicate maximum likelihood bootstrap (MLB) support values > 60% and Bayesian posterior probabilities (BPP) > 0.95, respectively (MLB/BPP). Schismatomma decolorans was used as an outgroup. The scale bar represents the expected number of changes per site.
The sequences of analyzed strains CBS 150720 and CBS 150721 clustered with sequences of type and additional strain of Capnobotryella antalyensis in a moderately supported clade (only in ML: MLB = 62%), which was sister to Arthrocatena tenebrosa with high support (MLB = 95%, BPP = 1). Capnobotryella antalyensis is recombined here to Arthrocatena. The sequence similarity between different strains of Arthrocatena antalyensis ranges between 97.4% and 98.7% in ITS. The sequence similarity between A. antalyensis and A. tenebrosa is 96.1–96.9% in ITS. Members of Arthrocatena formed a fully supported sister clade to single species lineage representing the genus and species Hyphoconis sterilis. The clustering of Arthrocatena + Hyphoconis was resolved at sister position (MLB = 69%, BPP = 1) to clades representing orders Cladosporiales and Comminutisporales. The new order Arthrocatenales and new family Arthrocatenaceae are proposed to this clade.
Named after the genus Arthrocatena.
Colonies erumpent, spreading, with elevated and folded center, greenish olivaceous, forming concentric rings, margin smooth, entire or undulate. Reverse black. Mycelium composed of branched, septate, pale brown or brown, smooth, straight, flexuose or torulose, thin-walled hyphae. Arthroconidia ellipsoid or broadly ellipsoid, rarely barrel-shaped, brown, smooth, one-septate, intercalary or on side branches, single or in chains. Chlamydospore-like cells spherical, brown, smooth, aseptate, intercalary, in simple or branched chains. Chlamydospores spherical, brown, smooth, muriformly septate, intercalary, single.
Arthrocatenaceae Piątek, Stryjak-Bogacka & Czachura.
Named after the genus Arthrocatena.
Colonies erumpent, spreading, with elevated and folded center, greenish olivaceous, forming concentric rings, margin smooth, entire or undulate. Reverse black. Mycelium composed of branched, septate, pale brown or brown, smooth, straight, flexuose or torulose, thin-walled hyphae. Arthroconidia ellipsoid or broadly ellipsoid, rarely barrel-shaped, brown, smooth, one-septate, intercalary or on side branches, single or in chains. Chlamydospore-like cells spherical, brown, smooth, aseptate, intercalary, in simple or branched chains. Chlamydospores spherical, brown, smooth, muriformly septate, intercalary, single.
Arthrocatena Egidi & Selbmann.
Capnobotryella antalyensis Sert & Sterfl., Mycol. Res. 111(10): 1237 (2007).
Turkey, Antalya, isolated from the surface of a child’s grave in Side museum (holotype: ACBR MA 4659).
Mycelium composed of branched, septate, pale brown or brown, smooth, straight, flexuose or torulose, thin-walled hyphae, 3.5–7.0 µm wide, consisting of elongated, subglobose, broadly ellipsoidal or pyriform cells, sometimes anastomosing; hyphae develop into arthroconidia, chlamydospore-like cells or chlamydospores. Arthroconidia ellipsoid or broadly ellipsoid, rarely barrel-shaped, brown, smooth, one-septate, 9.0–19.0(–23.0) × 6.5–8.5 µm, produced intercalary or rarely on side branches, single or in chains. Chlamydospore-like cells spherical, brown, smooth, aseptate, 7.0–12.0 × 7.0–10.0 µm, produced intercalary, in simple or branched chains. Chlamydospores spherical, brown, smooth, muriformly septate, 12.5–15.0 × 11.0–14.0 µm, produced intercalary, single between chlamydospore-like cells.
Morphology of Arthrocatena antalyensis (strain CBS 150720, e–h slide culture on PDA): a, b general view and detailed view of upper side of colony on MEA after 4 weeks of growth at 25 °C c, d general view and detailed view of upper side of colony on PDA after 4 weeks of growth at 25 °C e general view of hyphae f, g straight hyphae (note anastomosing hyphae visible on figure g) h terminal, flexuose and torulose hyphae. Scale bars: 50 µm (e); 10 µm (f–h).
Colonies on MEA erumpent, spreading, with elevated and folded center, greenish olivaceous, forming concentric rings, reaching 8 mm diam after 4 weeks growth at 15 °C and 12 mm diam after 4 weeks growth at 25 °C, surface with moderate aerial mycelium, margin smooth and entire, darker than the remaining part. Reverse black. Colonies on PDA erumpent, spreading, with elevated and folded center, greenish olivaceous, forming indistinct concentric rings, reaching 10 mm diam after 4 weeks growth at 15 °C and 14 mm diam after 4 weeks growth at 25 °C, surface with sparse aerial mycelium, margin smooth and undulate, concolours with the remaining part. Reverse black.
Morphology of Arthrocatena antalyensis (strain CBS 150720, slide culture on PDA): a general view of hyphae, arthroconidia and chlamydospore b–d arthroconidia e chlamydospore-like cells f–g chlamydospore-like cells and muriformly septate chlamydospores (indicated by arrows). Scale bars: 50 µm (a); 10 µm (b–g).
Poland, Silesian Province, Katowice County: Katowice-Bogucice, municipal greenery, isolated from sooty mould community on Tilia cordata leaves, 10 Sept. 2018, leg. M. Piątek, W. Bartoszek & P. Czachura (KRAM F-59837; culture: G57 = CBS 150720); Podkarpackie Province, Rzeszów County: Rzeszów–Generała Władysława Andersa, municipal greenery, isolated from sooty mould community on Pinus nigra needles, 17 Sept. 2018, leg. M. Piątek, W. Bartoszek & P. Czachura (KRAM F-59838; culture: G385 = CBS 150721).
Arthrocatena antalyensis differs from Arthrocatena tenebrosa in having larger arthroconidia (6.0–11.5 × 3.0–5.5 μm in A. tenebrosa;
Sooty moulds and communities formed by these fungi are still understudied and for that reason they are probably a rich source of interesting or undescribed species. Here, two Arthrocatena strains isolated from sooty mould communities on leaves of Tilia cordata and needles of Pinus nigra in southern Poland were analyzed. Interestingly, in the multi-locus phylogenetic analyses the sequences of the sooty mould strains grouped together with sequences of type and additional strain of Capnobotryella antalyensis (MA 4659 and MA 4775), a rock-inhabiting fungus described from two sites in Turkey (
The phylogenetic placement of Arthrocatena and its sister genus Hyphoconis remained unclear. In a study of
Our molecular phylogenetic analyses of the concatenated ITS-LSU-SSU-rpb2-tef1 alignment showed that Arthrocatena and Hyphoconis form a distinct lineage sister to orders Cladosporiales and Comminutisporales. Therefore, a new order Arthrocatenales is described to accommodate these two genera. These three orders have some ecological and morphological peculiarities that differentiate them. Cladosporiales accommodates hundreds of species that are mostly saprobic, rarely lichenicolous, endolithic, endophytic or plant parasitic and distributed over the whole world. They usually produce solitary conidiophores with chains of pigmented conidia, which germinate and grow very quickly on culture media (
Arthrocatena has been reported, in different and mostly metabarcoding studies, from gut of feather mites in Spain (
We are grateful to Wacław Bartoszek (Kraków, Poland) for help in the field work.
The authors have declared that no competing interests exist.
No ethical statement was reported.
This study was funded by the National Science Centre, Poland, under the project 2017/27/B/NZ9/02902.
MP: conceptualization, investigation, formal analyses, visualisation, writing – original draft preparation; MSB: investigation, formal analyses, visualisation, writing – review and editing; PC: investigation, writing – review and editing. All authors have read and approved the final version of the manuscript.
Marcin Piątek https://orcid.org/0000-0002-4968-2861
Monika Stryjak-Bogacka https://orcid.org/0000-0003-2845-9975
Paweł Czachura https://orcid.org/0000-0002-3562-8776
The data that support the findings of this study are available in GenBank (https://www.ncbi.nlm.nih.gov/genbank/) and in culture collections and fungal herbarium, as shown in Table
Phylogenetic tree of selected members of the Capnodiales s. lat., Dothideales and Myriangiales obtained from a maximum likelihood analysis of the combined multi-locus alignment (ITS, LSU, SSU, rpb2, tef1)
Data type: tif
Explanation note: The positions of new strains, Arthrocatena antalyensis comb. nov. and new order Arthrocatenales are indicated in bold. Schismatomma decolorans was used as an outgroup. The scale bar represents the expected number of changes per site.
Phylogenetic tree of selected members of the Capnodiales s. lat., Dothideales and Myriangiales obtained from a Bayesian inference analysis of the combined multi-locus alignment (ITS, LSU, SSU, rpb2, tef1)
Data type: tif
Explanation note: The positions of new strains, Arthrocatena antalyensis comb. nov. and new order Arthrocatenales are indicated in bold. Schismatomma decolorans was used as an outgroup. The scale bar represents the expected number of changes per site.