Research Article |
Corresponding author: Qian Chen ( chenqian3150@163.com ) Corresponding author: Xiao-Hong Lai ( l876193006@163.com ) Academic editor: Alfredo Vizzini
© 2024 Qian Chen, Han Chen, Cheng-Hang Luo, Xiao-Hong Lai.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Chen Q, Chen H, Luo C-H, Lai X-H (2024) Molecular phylogeny and morphology of the genus Fuscoporia (Hymenochaetales, Basidiomycota) and reveal three new species of the F. ferrea group. MycoKeys 111: 21-40. https://doi.org/10.3897/mycokeys.111.126446
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Fuscoporia is a polypore genus of Hymenochaetaceae that causes wood decay, although some species in the genus have medicinal values. Phylogenetic analyses of concatenated ITS1-5.8S-ITS2-nLSU sequence data and morphological features identified three new species, F. eucalypticola, F. resupinata and F. subtropica from Australia, China and Malaysia, and these new species derived from the Fuscoporia ferrea group. These three species are illustrated and described. A key to resupinate species of Fuscoporia without mycelial setae in the world is provided.
Hymenochaetaceae, phylogeny, polypore, taxonomy
The genus Fuscoporia Murrill (Hymenochaetales, Basidiomycota) with F. ferruginosa (Schrad.) Murrill as the type species was first described in 1907 (
Some species of Fuscoporia are difficult to identify because most morphological features of these species overlap. The recent studies revealed some traditional species of Fuscoporia are actually the species complex, such as, Fuscoporia contigua (Pers.) G. Cunn. (
Fuscoporia ferrea (Pers.) G. Cunn. (1948) was characterized by resupinate, annual to perennial basidiomata, cylindric spores and distribution in the Northern Hemisphere (
In the process of exploring of wood-decaying fungi, brown and resupinate specimens were collected from southern Asia and Australia, and their morphological characteristics, taxonomic relationships and phylogenetic affinities were analyzed. Three new taxa were confirmed within Fuscoporia ferrea group, and they are described and illustrated. A key to resupinate and mycelial setaeless species of Fuscoporia in the world is provided.
The research specimens are conserved in the herbarium of Microbiology, Beijing Forestry University (
According to the manufacturer’s instructions, a CTAB rapid plant genome extraction kit (Aidlab Biotechnologies Co., Ltd., Beijing, China) was used to obtain PCR products from dried samples. To generate PCR amplicons, the following primer pairs were used: ITS4 and ITS5 for the ITS1-5.8S-ITS2 region (
Species name, specimens, origin and GenBank accession number of sequences used in this study.
Species name | Specimens | Origin | GenBank accession no. | |
---|---|---|---|---|
ITS | nLSU | |||
Fuscoporia acutimarginata | Dai 15137 | China | MH050751 | MH050765 |
F. acutimarginata | Dai 16892 | China | MH050752 | MH050766 |
F. ambigua | Cui 9244 | China | MN816706 | MN809995 |
F. ambigua | JV 0509/151 | USA | MN816707 | MN809996 |
F. americana | JV 1209/3-J | USA | – | MG008466 |
F. americana | JV 1209/100 | USA | KJ940022 | MG008467 |
F. atlantica | SP 445618 | Brazil | KP058515 | KP058517 |
F. atlantica | SP 465829 | Brazil | KP058514 | KP058516 |
F. australasica | Dai 15625 | China | MN816726 | MN810018 |
F. australasica | Dai 15636 | China | MG008397 | MG008450 |
F. australiana | Dai 18672 | Australia | MN816703 | MN810014 |
F. australiana | Dai 18879 | Australia | MN816705 | MN810015 |
F. bambusae | Dai 16599 | Thailand | MN816711 | MN809999 |
F. bambusae | Dai 16615 | Thailand | MN816715 | MN810001 |
F. caymanensis | JV 1908/74 | French Guiana | MT676832 | MT676833 |
F. caymanensis | JV 1408/5 | Costa Rica | MW009110 | MW009109 |
F. callimorpha | Dai 17388 | Brazil | MN121765 | MN121824 |
F. callimorpha | Doll 868 | Unknown | MN816701 | MN809992 |
F. chinensis | Dai 15713 | China | MN816721 | MN810008 |
F. chinensis | Cui 11209 | China | MN121767 | MN121826 |
F. chrysea | JV 1607/106 | Costa Rica | MN816736 | MN810027 |
F. centroamericana | JV 1607/93 | Costa Rica | MG008444 | MG008460 |
F. centroamericana | O 908267 | Costa Rica | MG008443 | – |
F. contigua | Dai 16025 | USA | MG008401 | MG008454 |
F. contigua | Dai 13567A | Romania | MG008402 | MG008455 |
F. costaricana | JV 1407/92 | Costa Rica | MG008446 | MG008461 |
F. costaricana | JV 1504/85 | Costa Rica | MG008413 | MG478454 |
F. dhofarensis | ATN-007 | Oman | OP593104 | OP593105 |
F. dolichoseta | SFC20191015-23 | Korea | ON427765 | ON427795 |
F. dolichoseta | SFC20161006-16 | Korea | ON427789 | ON427817 |
F. eucalypti | Dai 18783 | Australia | MN816730 | MN810021 |
F. eucalypti | Dai 18792 | Australia | MN816731 | MN810022 |
F. eucalypticola | Dai 18592A | Australia | PP732562 | PP732631 |
F. eucalypticola | Dai 18683 | Australia | PP732563 | PP732632 |
F. ferrea | MUCL 45984 | France | KX961112 | KY189112 |
F. ferrea | Cui 11801 | China | KX961101 | KY189101 |
F. ferruginosa | JV 0408/28 | Czech Republic | KX961103 | KY189103 |
F. ferruginosa | Dai 13200 | France | MN816702 | MN809993 |
F. gilva | JV 0709/75 | USA | MN816720 | MN810007 |
F. gilva | JV 1209/65 | USA | MN816719 | MN810006 |
gilva | URM 83957 | Brazil | MH392545 | MH407344 |
gilvoides | SFC2018042‐12 | Korea | ON427763 | ON427793 |
gilvoides | MUGBt | Pakistan | ON427781 | ON427810 |
F. hainanensis | Dai 16105 | China | – | ON520809 |
F. hainanensis | Dai 16110 | China | – | ON520810 |
F. hawaiana | JV 2208/H-22-J | USA | OQ817709 | OQ817855 |
F. hawaiana | JV 2208/H-30-J | USA | OQ817710 | OQ817856 |
F. insolita | Spirin 5251 | Russia | KJ677113 | – |
F. insolita | Spirin 5208 | Russia | MN816724 | MN810016 |
F. karsteniana | Dai 16552 | China | MN816716 | MN810002 |
F. karsteniana | Dai 11403 | China | MN816717 | MN810003 |
F. kenyana | Dai 19205 | Kenya | OP580527 | OP580521 |
F. kenyana | Dai 19202 | Kenya | OP580526 | OP580520 |
F. koreana | SFC20150625-05 | Korea | ON427776 | ON427805 |
F. koreana | SFC20160726-93 | Korea | ON427762 | ON427792 |
F. latispora | JV 1109/48 | USA | MG008439 | MG008468 |
F. latispora | JV 0610/VII-Kout | Mexico | MG008436 | MG008469 |
F. licnoides | URM 84107 | Brazil | MH392556 | MH407355 |
F. licnoides | URM 83001 | Brazil | MH392561 | MH407357 |
F. marquesiana | URM 83094 | Brazil | MH392544 | MH407343 |
F. minutissima | JV 2208/H12-J | USA | OQ817711 | OQ817857 |
F. minutissima | JV 2208/H16-J | USA | OQ817712 | OQ817858 |
F. monticola | Dai 10909 | China | MG008410 | – |
F. monticola | Dai 11860 | China | MG008406 | MG008457 |
F. palomari | JV 1004/5-J | USA | MN816737 | – |
F. palomari | JV 1305/3-J | USA | MN816738 | MN810028 |
F. plumeriae | Dai 17814 | Singapore | MN816714 | MN810011 |
F. plumeriae | Dai 18858 | Australia | MN816712 | MN810010 |
F. punctatiformis | Dai 17443 | Brazil | MH050755 | MH050764 |
F. punctatiformis | Doll#872a | Brazil | MH050753 | – |
F. pulviniformis | CMW 48060 | South Africa | MH599101 | MH599125 |
F. pulviniformis | CMW 48600 | South Africa | MH599102 | MH599127 |
F. ramulicola | Dai 15723 | China | MH050749 | MH050762 |
F. ramulicola | Dai 16155 | China | MH050750 | MH050763 |
F. reticulata | SFC20121010-19 | Korea | ON427766 | – |
F. reticulata | SFC20160115-16 | Korea | ON427761 | ON427791 |
F. rhabarbarina | Dai 16550 | China | MN816744 | MN810036 |
F. rhabarbarina | Dai 16226 | China | MN816743 | MN810035 |
F. resupinata | Dai 20455 | China | PP732567 | PP732636 |
F. resupinata | Dai 20422 | China | PP732568 | PP732637 |
F. resupinata | Dai 21201 | Malaysia | PP732569 | PP732638 |
F. roseocinerea | JV 1407/84 | Costa Rica | MN816740 | MN810030 |
F. roseocinerea | JV 1109/78-J | USA | MN816742 | MN810032 |
F. rufitincta | JV 1008/25 | USA | KJ940029 | KX058575 |
F. rufitincta | JV 0904/142 | USA | KJ940030 | KX058574 |
F. sarcites | JV 0402/20K | Venezuela | MZ264225 | MZ264218 |
F. scruposa | CMW 48145 | South Africa | MH599105 | MH599130 |
F. scruposa | CMW 47749 | South Africa | MH599106 | MH599129 |
F. semiarida | URM 83800 | Brazil | MH392562 | MH407361 |
F. semiarida | URM 82510 | Brazil | MH392563 | MH407362 |
F. semicephala | SFC20170524-08 | Korea | ON427764 | ON427794 |
F. semicephala | SFC20170712-20 | Korea | ON427787 | ON427815 |
F. senex | MEL 2382630 | Australia | KP012992 | – |
F. senex | KAUNP MK41 | Sri Lanka | KP794600 | – |
F. septoseta | Dai 12820 | USA | MG008405 | MN810033 |
F. septoseta | JV 0509/78 | USA | MG008404 | – |
F. setifera | Dai 15710 | China | MH050758 | MH050767 |
F. setifera | Dai 15706 | China | MH050759 | MH050769 |
F. shoreae | Dai 17806 | Singapore | MN816734 | MN810025 |
F. shoreae | Dai 17818 | Singapore | MN816735 | MN810026 |
F. sinica | Dai 15468 | China | MG008412 | MG008459 |
F. sinica | Dai 15489 | China | MG008407 | MG008458 |
F. sinuosa | Dai 20498 | China | MZ264226 | MZ264219 |
F. sinuosa | Dai 20499 | China | MZ264227 | MZ264220 |
F. subchrysea | Dai 16201 | China | MN816708 | MN809997 |
F. subchrysea | Dai 17656 | China | MN816709 | MN809998 |
F. subferrea | Dai 16326 | China | KX961097 | KY053472 |
F. subferrea | Dai 16327 | China | KX961098 | KY053473 |
F. submurina | Dai 19501 | Sri Lanka | MZ264229 | MZ264222 |
F. submurina | Dai 19655 | Sri Lanka | MZ264228 | MZ264221 |
F. subtropica | Dai 20476 | China | PP732564 | PP732633 |
F. subtropica | Dai 19957 | China | PP732565 | PP732634 |
F. subtropica | Dai 22604 | China | PP732566 | PP732635 |
F. torulosa | JV 1405/2 | Czech Republic | KX961106 | KY189106 |
F. torulosa | Dai 15518 | China | MN816732 | MN810023 |
F. viticola | JV 0911/6 | Czech Republic | KX961110 | – |
F. viticola | He 2123 | USA | MN816725 | MN810017 |
F. wahlbergii | JV 1312/20-Kout | Spain | MN816727 | MG008462 |
F. wahlbergii | JV 0709/169-J | USA | MN816728 | – |
F. yunnanensis | Cui 8182 | China | MH050756 | MN810029 |
F. yunnanensis | Dai 15637 | China | MH050757 | MH050768 |
Outgroups | ||||
Coniferiporia weirii | CFS 504 | Canada | AY829341 | AY829345 |
Phellinidium fragrans | CBS 202.90 | USA | AY558619 | AY05027 |
The following software was used for data processing and phylogenetic analysis: BioEdit (
In Maximum likelihood (ML) methods, statistical support values were obtained by using nonparametric bootstrapping with 1000 replicates, with default settings for all parameters. For BI analysis, the best-fit partitioning scheme and substitution model were determined by using ModelFinder (
In this study, the data set of ITS and nLSU region included 118 ITS and 110 nLSU sequences from 121 samples, representing 61 species of Fuscoporia and Coniferiporia weirii (Murrill) L.W. Zhou & Y.C. Dai and Phellinidium fragrans (M.J. Larsen & Lombard) Nuss as the outgroups (Table
Maximum Likelihood (ML) tree illustrating the phylogeny of Fuscoporia and related species generated inferred from a combined ITS1-5.8S-ITS2-nLSU dataset. Statistical values (ML//BI/MP) are indicated for each node that received bootstrap support from ML and MP ≥ 75% and BPP ≥ 0.90. Names of new species are in bolds.
Australia • Victoria, Yarra Ranges National Park, on fallen branch of Eucalyptus, 9 May 2018, Dai 18592A (
Eucalypticola (Lat.): refere to the species growing on Eucalyptus.
Basidiomata. Annual, resupinate, inseparable from the substrate, without odor or taste and corky when fresh, rigid when dry, up to 20 cm long, 3 cm wide and 1.5 mm thick at center. Pore olivaceous buff to greyish brown; sterile margin narrow or almost lacking, buff, up to 1 mm wide; pores irregular or sinuous, 3–5 per mm; dissepiments thin, entire, abundant setae seen in tube cavities (under lens). Subiculum clay-buff, corky, about 0.1 mm thick. Tubes olivaceous buff, up to 1 mm long.
Hyphal structure. Hyphal system dimitic; generative hyphae simple septate; tissue becoming black in KOH.
Subiculum. Generative hyphae infrequently, thin-walled, frequently branched, simple septate, 1.5–2.5 μm in diam; skeletal hyphae dominant, yellowish brown, thick-walled with a medium lumen, unbranched, aseptate, flexuous, strongly interwoven, 2–3 μm in diam.
Tubes. Generative hyphae infrequent, mostly present at subhymenium, hyaline, thin-walled, frequently branched, simple septate, 1.5–2.5 μm in diam; skeletal hyphae dominant, yellowish brown, thick-walled with a wide lumen, unbranched, aseptate, loosely interwoven to subparallel along the tubes, 2–3 μm in diam. Setae frequent, mostly originating from hymenium, subulate, dark brown, thick-walled, 30–60 × 4–6 μm; fusoid cystidioles frequent, hyaline and thin-walled, 25–32 × 2–4 μm; basidia barrel-shaped, with four sterigmata and a simple septum at the base, 20–25 × 4–7 μm; basidioles in shape similar to basidia, but slightly smaller.
Basidiospores. Basidiospores cylindric, hyaline, thin-walled, smooth, IKI–, CB–, sometimes with a small guttule, 6.2–8 × (2–)2.1–3 μm, L = 7.03 μm, W = 2.37 μm, Q = 2.86–3.05 (n = 60/2).
Australia • Melbourne, Dandenong Ranges Botanical Garden, on fallen branch of Eucalyptus, 12 May 2018, Dai 18683 (
China • Yunnan Province, Pu’er, Taiyanghe National Forest Park, on dead angiosperm tree, 17 August 2019, Dai 20455 (BJFC032123).
Resupinata (Lat.): refers to the species having resupinate basidiomata.
Basidiomata. Annual, resupinate, inseparable from the substrate, without odor or taste and corky when fresh, rigid when dry, up to 10.6 cm long, 4 cm wide and 1.2 mm thick at center. Pore surface fawn when fresh, snuff brown when dry; sterile margin indistinct, honey-yellow when dry, up to 1 mm wide, paler than color than the pore surface; pores circular to angular, 5–7 per mm; dissepiments thin, entire, abundant setae seen in tube cavities (under lens). Subiculum honey yellow, corky, about 0.2 mm thick. Tubes grayish brown, paler contrasting with pores, rigid, up to 1 mm long.
Hyphal structure. Hyphal system dimitic; generative hyphae simple septate; tissue becoming black in KOH.
Subiculum. Generative hyphae infrequently, thin-walled, frequently branched, simple septate, 1–1.5 μm in diam; skeletal hyphae dominant, yellowish brown, thick-walled with a narrow to medium lumen, unbranched, aseptate, flexuous, strongly interwoven, 3–4 μm in diam.
Tubes. Generative hyphae infrequent, mostly present at subhymenium, hyaline, thin-walled, frequently branched, simple septate, 1–2 μm in diam; skeletal hyphae dominant, yellowish brown, thick-walled with a narrow to medium lumen, unbranched, aseptate, loosely interwoven, 2–5 μm in diam. Setae frequent, mostly originating from hymenium, subulate, dark brown, thick-walled, 20–30 × 5–7 μm; fusoid cystidioles frequent, hyaline and thin-walled, sometimes covered with crystals, 8–12 × 3.5–5 μm; basidia barrel-shaped, with four sterigmata and a simple septum at the base, 16–20 × 6–8 μm; basidioles in shape similar to basidia, but slightly smaller.
Basidiospores. Basidiospores cylindric, hyaline, thin-walled, smooth, usually glued in tetrads, IKI–, CB–, sometimes with guttules, (5.4–)5.5–7(–7.2) × (2.4–)2.5–3 μm, L = 6.38 μm, W = 2.71 μm, Q = 2.29–2.44 (n = 60/2).
China • Yunnan Province, Xinping County, Longquan Park, on fallen angiosperm branch, 16 August 2019, Dai 20422 (
China • Yunnan Province, Wenshan Zhuang and Miao Autonomous Region, Xichou County, Xiaoqiaogou Forest Farm, on fallen angiosperm trunk, 29 June 2019, Dai 19957 (
Subtropica (Lat.): refers to the species being found in subtropical area.
Basidiomata. Annual, resupinate, inseparable from the substrate, without odor or taste and corky when fresh, rigid when dry, up to 15 cm long, 8 cm wide and 2.5 mm thick at center. Pore surface grayish brown to honey-yellow; sterile margin indistinct, curry-yellow, up to 1 mm wide; pores irregular to angular, sometimes sinuous, 3–5 per mm; dissepiments thin, entire, abundant setae seen in tube cavities (under lens). Subiculum clay-buff, corky, about 0.5 mm thick. Tubes olivaceous buff, up to 2 mm long.
Hyphal structure. Hyphal system dimitic; generative hyphae simple septate; tissue becoming black in KOH.
Subiculum. Generative hyphae infrequently, thin-walled, frequently branched, simple septate, 2–3 μm in diam; skeletal hyphae dominant, yellowish brown, thick-walled with a medium lumen, unbranched, aseptate, flexuous, strongly interwoven, 3–4 μm in diam.
Tubes. Generative hyphae infrequent, mostly present at subhymenium, hyaline, thin-walled, frequently branched, simple septate, 2–3 μm in diam; skeletal hyphae dominant, yellowish brown, thick-walled with a narrow to medium lumen, unbranched, aseptate, loosely interwoven, 2–4 μm in diam. Setae frequent, mostly originating from hymenium, subulate, dark brown, thick-walled, 35–55 × 4–7 μm; fusoid cystidioles frequent, hyaline and thin-walled, 18–26 × 4–6 μm; basidia barrel-shaped, with four sterigmata and a simple septum at the base, 14–18 × 4–6 μm; basidioles in shape similar to basidia, but slightly smaller.
Basidiospores. Basidiospores cylindric, hyaline, thin-walled, smooth, IKI–, CB–, (5.5–)6–7.5(–8) × 2–3(–3.2) μm, L = 6.91 μm, W = 2.66 μm, Q = 2.32–2.71 (n = 50/2).
China • Yunnan Province, Pu’er, Pu’er Forest Park, Xiniuping Scenic Area, on fallen angiosperm branch, 17 August 2019, Dai 20476 (
Fuscoporia is a polypore genus causing wood decay, associated with angiosperms and gymnosperms (
The recent studies (
The species in the Fuscoporia ferrea group have similar morphological characteristics, which sometimes may be confused. However, F. ferrea and F. punctatiformis can be segregated from the three new species by their perennial basidiomata (
Southern Asia is among the regions with the highest fungal biodiversity, especially in southern China (
1 | Basidiomata perennial | 2 |
– | Basidiomata annual to biennial | 4 |
2 | Basidiospores narrowly ovoid to narrow ellipsoid | F. montana Y.C. Dai & Niemela |
– | Basidiospores cylindric to subcylindrical | 3 |
3 | Basidiospores 4–6 × 1.5–2 μm | F. punctatiformis |
– | Basidiospores 6–7.8 × 2–2.5 μm | F. ferrea |
4 | Pores 3–5 per mm | 5 |
– | Pores 5–10 per mm | 7 |
5 | Pores circular, dissepiments entire and matted | F. yunnanensis |
– | Pores sinuous or irregular or daedaleoid, dissepiments entire and slightly lacerate with age | 6 |
6 | Basidiospores without guttule, Q = 2.32–2.71, distribution in China | F. subtropica |
– | Basidiospores occasionally with a small guttule, Q = 2.86–3.05, distribution in Australia | F. eucalypticola |
7 | Pores 7–10 per mm; basidiospores 4.2–6.2 μm long, Q = 2.15–2.27 | F. subferrea |
– | Pores 5–7 per mm, basidiospores 5.5–7 μm long, Q > 2.27 | 8 |
8 | Basidiospores 2.5–3 μm wide, Q = 2.29–2.44 | F. resupinata |
– | Basidiospores 2–2.5 μm wide, Q = 2.57–2.88 | F. ramulicola |
We are grateful to Prof. Yu-Cheng Dai (Beijing Forestry University) who allowed us to study his specimens. We would like to extend our thanks to the executive editor and anonymous reviewers for their suggestions and corrections to improve our work.
The authors have declared that no competing interests exist.
No ethical statement was reported.
This research was financed by the National Natural Science Foundation of China (project no. 32100014), the Science and Technology Research Program of Chongqing Municipal Education Commission (grant no. KJQN202100737) and the Natural Science Foundation of Chongqing Science and Technology Bureau (grant no. CSTB2022NSCQ-MSX1345).
Data curation: HC. Investigation: CHL. Writing - original draft: QC. Writing - review and editing: XHL.
Qian Chen https://orcid.org/0000-0001-7355-714X
Han Chen https://orcid.org/0009-0001-8424-9916
Cheng-Hang Luo https://orcid.org/0009-0005-6059-6373
Xiao-Hong Lai https://orcid.org/0000-0001-5393-4307
All of the data that support the findings of this study are available in the main text.