Hossein Masigol, Seyed Akbar Khodaparast, Jason Nicholas Woodhouse, Keilor Rojas‐Jimenez, Jeremy Fonvielle, Forough Rezakhani, Reza Mostowfizadeh‐Ghalamfarsa, Darshan Neubauer, Tobias Goldhammer, Hans‐Peter Grossart (2019)
The contrasting roles of aquatic fungi and oomycetes in the degradation and transformation of polymeric organic matter.
Limnology and Oceanography64: 2662.
DOI: 10.1002/lno.11242
Peixue Song, Shoko Tanabe, Rong Yi, Maiko Kagami, Xin Liu, Syuhei Ban (2018)
Fungal community structure at pelagic and littoral sites in Lake Biwa determined with high-throughput sequencing.
Limnology19: 241.
DOI: 10.1007/s10201-017-0537-8
Liisi Talas, Normunds Stivrins, Siim Veski, Leho Tedersoo, Veljo Kisand (2021)
Sedimentary Ancient DNA (sedaDNA) Reveals Fungal Diversity and Environmental Drivers of Community Changes throughout the Holocene in the Present Boreal Lake Lielais Svētiņu (Eastern Latvia).
Microorganisms9: 719.
DOI: 10.3390/microorganisms9040719
Kalyani Sen, Mohan Bai, Biswarup Sen, Guangyi Wang (2021)
Disentangling the structure and function of mycoplankton communities in the context of marine environmental heterogeneity.
Science of The Total Environment766: 142635.
DOI: 10.1016/j.scitotenv.2020.142635
Henrik Drake, Magnus Ivarsson (2018)
The role of anaerobic fungi in fundamental biogeochemical cycles in the deep biosphere.
Fungal Biology Reviews32: 20.
DOI: 10.1016/j.fbr.2017.10.001
Hans-Peter Grossart, Silke Van den Wyngaert, Maiko Kagami, Christian Wurzbacher, Michael Cunliffe, Keilor Rojas-Jimenez (2019)
Fungi in aquatic ecosystems.
Nature Reviews Microbiology17: 339.
DOI: 10.1038/s41579-019-0175-8
Jun Zhao, Peng Wang, Xiaofang Yu, Wang Shu, Qiyu Xu (2019)
Structure and Composition of Sediment-Associated Bacterial and Eukaryotic Communities in the River–Lake System of Poyang Lake, China.
Geomicrobiology Journal36: 727.
DOI: 10.1080/01490451.2019.1611975
Lauren Cortez French, Michelle A. Jusino, Randolph M. Chambers, James Skelton (2024)
Community structure and functional diversity of aquatic fungi are correlated with water quality: Insights from multi‐marker analysis of environmental DNA in a coastal watershed.
Environmental DNA6: .
DOI: 10.1002/edn3.576
Magnus Ivarsson, Stephanos Kilias, Curt Broman, Anna Neubeck, Henrik Drake, Ernest Chi Fru, Stefan Bengtson, Jonathan Naden, Kleopatra Detsi, Martin Whitehouse (2019)
Exceptional Preservation of Fungi as H2-Bearing Fluid Inclusions in an Early Quaternary Paleo-Hydrothermal System at Cape Vani, Milos, Greece.
Minerals9: 749.
DOI: 10.3390/min9120749
Rakel Blaalid, Maryia Khomich (2021)
Current knowledge of Chytridiomycota diversity in Northern Europe and future research needs.
Fungal Biology Reviews36: 42.
DOI: 10.1016/j.fbr.2021.03.001
Ali Nawaz, Witoon Purahong, Robert Lehmann, Martina Herrmann, Kai Uwe Totsche, Kirsten Küsel, Tesfaye Wubet, François Buscot (2018)
First insights into the living groundwater mycobiome of the terrestrial biogeosphere.
Water Research145: 50.
DOI: 10.1016/j.watres.2018.07.067
Mia M. Bengtsson, Katrin Attermeyer, Núria Catalán (2018)
Interactive effects on organic matter processing from soils to the ocean: are priming effects relevant in aquatic ecosystems?.
Hydrobiologia822: 1.
DOI: 10.1007/s10750-018-3672-2
Hao Wang, Gary W. Feyereisen, Jiwei Zhang, Satoshi Ishii (2025)
Fungal degradation of complex organic carbon supports denitrification in saturated woodchip bioreactors.
Bioresource Technology417: 131826.
DOI: 10.1016/j.biortech.2024.131826
R. Henrik Nilsson, Sten Anslan, Mohammad Bahram, Christian Wurzbacher, Petr Baldrian, Leho Tedersoo (2019)
Mycobiome diversity: high-throughput sequencing and identification of fungi.
Nature Reviews Microbiology17: 95.
DOI: 10.1038/s41579-018-0116-y
Mina Bižić-Ionescu, Danny Ionescu, Hans-Peter Grossart (2018)
Organic Particles: Heterogeneous Hubs for Microbial Interactions in Aquatic Ecosystems.
Frontiers in Microbiology9: .
DOI: 10.3389/fmicb.2018.02569
Joan E. Edwards, Robert J. Forster, Tony M. Callaghan, Veronika Dollhofer, Sumit S. Dagar, Yanfen Cheng, Jongsoo Chang, Sandra Kittelmann, Katerina Fliegerova, Anil K. Puniya, John K. Henske, Sean P. Gilmore, Michelle A. O'Malley, Gareth W. Griffith, Hauke Smidt (2017)
PCR and Omics Based Techniques to Study the Diversity, Ecology and Biology of Anaerobic Fungi: Insights, Challenges and Opportunities.
Frontiers in Microbiology8: .
DOI: 10.3389/fmicb.2017.01657
Alessia Marchetta, Maria Papale, Alessandro Ciro Rappazzo, Carmen Rizzo, Antonio Camacho, Carlos Rochera, Maurizio Azzaro, Clara Urzì, Angelina Lo Giudice, Filomena De Leo (2023)
A Deep Insight into the Diversity of Microfungal Communities in Arctic and Antarctic Lakes.
Journal of Fungi9: 1095.
DOI: 10.3390/jof9111095
Corey C. Holt, Vittorio Boscaro, Niels W. L. Van Steenkiste, Maria Herranz, Varsha Mathur, Nicholas A. T. Irwin, Gracy Buckholtz, Brian S. Leander, Patrick J. Keeling (2022)
Microscopic marine invertebrates are reservoirs for cryptic and diverse protists and fungi.
Microbiome10: .
DOI: 10.1186/s40168-022-01363-3
P Song, R Yi, S Tanabe, N Goto, K Seto, M Kagami, S Ban (2021)
Temporal variation in community structure of zoosporic fungi in Lake Biwa, Japan.
Aquatic Microbial Ecology87: 17.
DOI: 10.3354/ame01970
Marie Therese Kettner, Keilor Rojas‐Jimenez, Sonja Oberbeckmann, Matthias Labrenz, Hans‐Peter Grossart (2017)
Microplastics alter composition of fungal communities in aquatic ecosystems.
Environmental Microbiology19: 4447.
DOI: 10.1111/1462-2920.13891
Radka Sudová, Petr Kohout, Jana Rydlová, Martina Čtvrtlíková, Jan Suda, Jana Voříšková, Zuzana Kolaříková (2020)
Diverse fungal communities associated with the roots of isoetid plants are structured by host plant identity.
Fungal Ecology45: 100914.
DOI: 10.1016/j.funeco.2020.100914
Christian Wurzbacher, Agnes-Katharina Kreiling, Sten Svantesson, Silke Van den Wyngaert, Ellen Larsson, Felix Heeger, Henrik R. Nilsson, Snæbjörn Pálsson (2020)
Fungal communities in groundwater springs along the volcanic zone of Iceland.
Inland Waters10: 418.
DOI: 10.1080/20442041.2019.1689065
Silke Van den Wyngaert, Lars Ganzert, Kensuke Seto, Keilor Rojas-Jimenez, Ramsy Agha, Stella A Berger, Jason Woodhouse, Judit Padisak, Christian Wurzbacher, Maiko Kagami, Hans-Peter Grossart (2022)
Seasonality of parasitic and saprotrophic zoosporic fungi: linking sequence data to ecological traits.
The ISME Journal16: 2242.
DOI: 10.1038/s41396-022-01267-y
Isabell Klawonn, Susanne Dunker, Maiko Kagami, Hans-Peter Grossart, Silke Van den Wyngaert (2023)
Intercomparison of Two Fluorescent Dyes to Visualize Parasitic Fungi (Chytridiomycota) on Phytoplankton.
Microbial Ecology85: 9.
DOI: 10.1007/s00248-021-01893-7
Kingsly C. Beng, Justyna Wolinska, Elisabeth Funke, Silke Van den Wyngaert, Alena S. Gsell, Michael T. Monaghan (2021)
Temporal dynamics of freshwater planktonic parasites inferred using a DNA metabarcoding time-series.
Parasitology148: 1602.
DOI: 10.1017/S0031182021001293
Henrik Drake, Magnus Ivarsson, Christine Heim, Oona Snoeyenbos-West, Stefan Bengtson, Veneta Belivanova, Martin Whitehouse (2021)
Fossilized anaerobic and possibly methanogenesis-fueling fungi identified deep within the Siljan impact structure, Sweden.
Communications Earth & Environment2: .
DOI: 10.1038/s43247-021-00107-9
Christian Wurzbacher, Ellen Larsson, Johan Bengtsson‐Palme, Silke Van den Wyngaert, Sten Svantesson, Erik Kristiansson, Maiko Kagami, R. Henrik Nilsson (2019)
Introducing ribosomal tandem repeat barcoding for fungi.
Molecular Ecology Resources19: 118.
DOI: 10.1111/1755-0998.12944
Keilor Rojas-Jimenez, Angelika Rieck, Christian Wurzbacher, Klaus Jürgens, Matthias Labrenz, Hans-Peter Grossart (2019)
A Salinity Threshold Separating Fungal Communities in the Baltic Sea.
Frontiers in Microbiology10: .
DOI: 10.3389/fmicb.2019.00680
L. Perini, C. Gostinčar, N. Gunde-Cimerman (2019)
Fungal and bacterial diversity of Svalbard subglacial ice.
Scientific Reports9: .
DOI: 10.1038/s41598-019-56290-5
M. D. Fedorova, A. V. Kurakov (2023)
Microbiota of Bottom Sediments in the Coastal Zone of Lake Baikal.
Contemporary Problems of Ecology16: 492.
DOI: 10.1134/S1995425523040030
J. Pawlowski, K. Bruce, K. Panksep, F.I. Aguirre, S. Amalfitano, L. Apothéloz-Perret-Gentil, T. Baussant, A. Bouchez, L. Carugati, K. Cermakova, T. Cordier, C. Corinaldesi, F.O. Costa, R. Danovaro, A. Dell'Anno, S. Duarte, U. Eisendle, B.J.D. Ferrari, F. Frontalini, L. Frühe, A. Haegerbaeumer, V. Kisand, A. Krolicka, A. Lanzén, F. Leese, F. Lejzerowicz, E. Lyautey, I. Maček, M. Sagova-Marečková, J.K. Pearman, X. Pochon, T. Stoeck, R. Vivien, A. Weigand, S. Fazi (2022)
Environmental DNA metabarcoding for benthic monitoring: A review of sediment sampling and DNA extraction methods.
Science of The Total Environment818: 151783.
DOI: 10.1016/j.scitotenv.2021.151783
Robert Taube, Lars Ganzert, Hans-Peter Grossart, Gerd Gleixner, Katrin Premke (2018)
Organic matter quality structures benthic fatty acid patterns and the abundance of fungi and bacteria in temperate lakes.
Science of The Total Environment610-611: 469.
DOI: 10.1016/j.scitotenv.2017.07.256
Felix Heeger, Elizabeth C. Bourne, Christiane Baschien, Andrey Yurkov, Boyke Bunk, Cathrin Spröer, Jörg Overmann, Camila J. Mazzoni, Michael T. Monaghan (2018)
Long‐read DNA metabarcoding of ribosomal RNA in the analysis of fungi from aquatic environments.
Molecular Ecology Resources18: 1500.
DOI: 10.1111/1755-0998.12937
Keilor Rojas-Jimenez, Christian Wurzbacher, Elizabeth Charlotte Bourne, Amy Chiuchiolo, John C. Priscu, Hans-Peter Grossart (2017)
Early diverging lineages within Cryptomycota and Chytridiomycota dominate the fungal communities in ice-covered lakes of the McMurdo Dry Valleys, Antarctica.
Scientific Reports7: .
DOI: 10.1038/s41598-017-15598-w
Doris Ilicic, Hans-Peter Grossart (2022)
Basal Parasitic Fungi in Marine Food Webs—A Mystery Yet to Unravel.
Journal of Fungi8: 114.
DOI: 10.3390/jof8020114
Yongquan Shang, Xiaoyang Wu, Xibao Wang, Huashan Dou, Qinguo Wei, Shengchao Ma, Guolei Sun, Lidong Wang, Weilai Sha, Honghai Zhang (2022)
Environmental factors and stochasticity affect the fungal community structures in the water and sediments of Hulun Lake, China.
Ecology and Evolution12: .
DOI: 10.1002/ece3.9510
Tianma Yuan, Haihan Zhang, Qiaoli Feng, Xiangyu Wu, Yixin Zhang, Alan J. McCarthy, Raju Sekar (2020)
Changes in Fungal Community Structure in Freshwater Canals across a Gradient of Urbanization.
Water12: 1917.
DOI: 10.3390/w12071917
Jaime Aguayo, Céline Fourrier-Jeandel, Claude Husson, Renaud Ioos, Emma R. Master (2018)
Assessment of Passive Traps Combined with High-Throughput Sequencing To Study Airborne Fungal Communities.
Applied and Environmental Microbiology84: .
DOI: 10.1128/AEM.02637-17
Julia Vinzelj, Akshay Joshi, Heribert Insam, Sabine Marie Podmirseg (2020)
Employing anaerobic fungi in biogas production: challenges & opportunities.
Bioresource Technology300: 122687.
DOI: 10.1016/j.biortech.2019.122687
Andrea Čačković, Katarina Kajan, Lorena Selak, Tamara Marković, Andrijana Brozičević, Petra Pjevac, Sandi Orlić, Michael J. Imperiale (2023)
Hydrochemical and Seasonally Conditioned Changes of Microbial Communities in the Tufa-Forming Freshwater Network Ecosystem.
mSphere8: .
DOI: 10.1128/msphere.00602-22
Hannah E. Wahl, Daniel B. Raudabaugh, Elizabeth M. Bach, Tiffany S. Bone, Mark R. Luttenton, Robert H. Cichewicz, Andrew N. Miller (2018)
What lies beneath? Fungal diversity at the bottom of Lake Michigan and Lake Superior.
Journal of Great Lakes Research44: 263.
DOI: 10.1016/j.jglr.2018.01.001
Yuga Hirakata, Masashi Hatamoto, Mamoru Oshiki, Takahiro Watari, Kyohei Kuroda, Nobuo Araki, Takashi Yamaguchi (2019)
Temporal variation of eukaryotic community structures in UASB reactor treating domestic sewage as revealed by 18S rRNA gene sequencing.
Scientific Reports9: .
DOI: 10.1038/s41598-019-49290-y
Sofia Duarte, Christian Wurzbacher, Sahadevan Seena (2020)
Methods to Study Litter Decomposition.
Chapter 37: 339.
DOI: 10.1007/978-3-030-30515-4_37
Jürgen Schwoerbel, Heinz Brendelberger (2022)
Einführung in die Limnologie.
Chapter 8: 171.
DOI: 10.1007/978-3-662-63334-2_8
Y. Hirakata, M. Hatamoto, M. Oshiki, N. Araki, T. Yamaguchi (2017)
Frontiers in Wastewater Treatment and Modelling.
Chapter 34: 218.
DOI: 10.1007/978-3-319-58421-8_34
Hans‐Peter Grossart, Silke Van den Wyngaert, Maiko Kagami, Christian Wurzbacher, Michael Cunliffe, Keilor Rojas‐Jimenez (2020)
Handbuch Angewandte Limnologie: Grundlagen ‐ Gewässerbelastung ‐ Restaurierung ‐ Aquatische Ökotoxikologie ‐ Bewertung ‐ Gewässerschutz.
: 1.
DOI: 10.1002/9783527678488.hbal2019002
Hans-Peter Grossart, Elhagag Ahmed Hassan, Hossein Masigol, Maria Arias-Andres, Keilor Rojas-Jimenez (2022)
Encyclopedia of Inland Waters.
: 667.
DOI: 10.1016/B978-0-12-819166-8.00025-6