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Article title
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Abstract
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Key words
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Introduction
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Methods
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Sampling site
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Sampling
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DNA extraction
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Library preparation for pyrosequencing
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Sequence data processing
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Habitat richness and statistics
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Multivariate analyses
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Alternative sequence data processing
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Phylogenetic inference
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Results
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Discussion
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Methodological considerations
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Water and large plankton
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Sediment
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Biofilm (Periphyton)
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Benthic and reed samples (CPOM)
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Conclusions
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Acknowledgments
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References
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Supplementary materials
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